Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03731 ATGGCAATTCAACACACTATATTTCTACTTGCTGCTTTTCTTCTTCAATTCTCATCACTACACTTCCCCTCACTTGCATATGATCACCAAAACACATACTTCATCAATTGTGGCTCAGATATTCAAGTTAATGAAAATAACAACGTTTATATTGGTGAATCAAACCCTAACTACCCTAAAACAAGTTTCAGCAGCATTAGCTACCCTGAAAGCAATCAATCAACAGTGCCTTCAACTCTCTACCAAAGAGCAAGAATTTTCCATTCTGAATCTTCCTATGAATTTGATACGCTCCCAAACAACACCTACATGGTACGTTTCCATTTCTTTTCATTCTCTTCACCAATTAACCTTTACACTGCAAAATTCAGCGTTTCCGTTCCTGGTTTCTCTCTGTTACAAAACTTCTACGCTAAAAACACGACAAACCCTGGCTTAGTAAAAGAGTATTTCGTTAAAATCATCGGAAAAAGATTCAACATCACTTTCACACCTCTAAATTCATCATTTGCATTTGTTAACGCAATAGAACTCTTTATGGTCCCAACTCATTTAATCCCTGATTCAGTCCCACGTTTCACTTACACCGGTTCTACTGGTCGAGGCTTAACCATTTATAGTAACGATTTCCTCTCACGAGCTTTGGAAACCAAACACCGTCTAAATGTTGGCGGTGAAAATGTCACTAGAGAAACCGATAACTTATCGAGAGAGTGGTTACCAGATGACAGTTATATAACTGATCCACAAAACGCTAACAATAGTACCTATTTTGGAGGTAAAATTAAGCGTGCTACTGATGAATCTGATGGTCTCCATTCAGATCAATATAATGCTCCTGATGTTGTTTACCAAACTGCCAAACAGAGTAAAAATGGTTCTAACGGTTTAAATATAAGTTGGAGTGTTCCTGTGGAGAAGAATCTAGATCATTTCCTTAGGCTTCACTTTTGTGACAATATTAATCCCCAGGGTCTACTTACAACCTTCATTCTCAATATTTATGACCAGAGTGTTATTACAGATTTAAATAGTGACACAGAAGAGTTTTCTCCTTATTATTATGATTTTGTGGTTCGTTCTGATGGCTCTGGACTATTGAATGTCAGTGTAGTACCTAATACAACAACTACTACACCGAACGCGTTTTTAAACGGGCTTGAACTAATGAAAGTGATTGAATCGTCAGGTTTGATTCCATTAGATGATTCAGATTCTAATTCGAAGATTAATGTTCACGTGGTGGTTGGTTCGGTCGTTGGAGTTTTAGTTTTGGTTTCTGTTGTGATGAGGATAATTGGTTATAAGGAAGTTCTCAAGAATGGAATAAGTGTAGCAGTGAAAAGAAGTGTTCCGGGGTCAGGGTATTGTGATGAAAGGGATGAAATGATACTTGTTTATGAGTACATGGAAAAAGGGACGCTTAGAGAGAATTTGTACAATACGAATTTGCTTTATTTGACTTGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGTAGCTGGTGGAATAATTCACCGTGATGTGAAATCTACCAACATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACAGAACAAAACATCTTACAGAAAAAATCTGATGTTTATTCTTTTGGGGTGGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCCATTGATTTGTCTTGTCCAAGTGAGCAAGTCAATTTGGCTAAGTGGGGATTGTTGTGCAAAGAAAAAGCTATACTTGAAGATATCGTTGATCCTTCCATCATGCGACAAATTAATCAAAACTCACTTAGAATATTTAGCGAGACCGTGGTAAAATGCTTACAGGATTATGGTTGTGATAGGCCAACAATGGTTGATGTGTTGTGGGACTTGCAATATGCTTTGCAACTCCAAATAGAACCACATGAGGATAGTTCTAGCAGTGCTTTTAGATCACTTCAATTGCCTAATGTTCAACATTTACCTTCTATGTCTACATTGATTGAAGTGGATGGCATGTCTATTGGGAGGCTTGATGAATCTGAAACTACAACATCGATGATGCTAGATAGAATTTCTTGTGAAGCTAATCATGGCACAACAATCAACTCGCAAGTTTCCATTGGAGAGTTGTTTTTTTAG 2166 0.3758 MAIQHTIFLLAAFLLQFSSLHFPSLAYDHQNTYFINCGSDIQVNENNNVYIGESNPNYPKTSFSSISYPESNQSTVPSTLYQRARIFHSESSYEFDTLPNNTYMVRFHFFSFSSPINLYTAKFSVSVPGFSLLQNFYAKNTTNPGLVKEYFVKIIGKRFNITFTPLNSSFAFVNAIELFMVPTHLIPDSVPRFTYTGSTGRGLTIYSNDFLSRALETKHRLNVGGENVTRETDNLSREWLPDDSYITDPQNANNSTYFGGKIKRATDESDGLHSDQYNAPDVVYQTAKQSKNGSNGLNISWSVPVEKNLDHFLRLHFCDNINPQGLLTTFILNIYDQSVITDLNSDTEEFSPYYYDFVVRSDGSGLLNVSVVPNTTTTTPNAFLNGLELMKVIESSGLIPLDDSDSNSKINVHVVVGSVVGVLVLVSVVMRIIGYKEVLKNGISVAVKRSVPGSGYCDERDEMILVYEYMEKGTLRENLYNTNLLYLTWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKVADFGLSRTEQNILQKKSDVYSFGVVLLEVLCARPAIDLSCPSEQVNLAKWGLLCKEKAILEDIVDPSIMRQINQNSLRIFSETVVKCLQDYGCDRPTMVDVLWDLQYALQLQIEPHEDSSSSAFRSLQLPNVQHLPSMSTLIEVDGMSIGRLDESETTTSMMLDRISCEANHGTTINSQVSIGELFF 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03731 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Trre15g03731 721 Gene3D Transferase(Phosphotransferase) domain 1 545 646 - -
Trre15g03731 721 SUPERFAMILY Protein kinase-like (PK-like) 439 646 IPR011009 -
Trre15g03731 721 Gene3D - 27 181 - -
Trre15g03731 721 Gene3D - 214 393 - -
Trre15g03731 721 Pfam Malectin-like domain 35 392 IPR024788 -
Trre15g03731 721 Pfam Protein tyrosine and serine/threonine kinase 454 543 IPR001245 GO:0004672|GO:0006468
Trre15g03731 721 Gene3D Transferase(Phosphotransferase) domain 1 470 544 - -
Trre15g03731 721 SMART serkin_6 410 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03731 721 ProSiteProfiles Protein kinase domain profile. 356 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03731 721 PANTHER OS03G0124300 PROTEIN-RELATED 6 432 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03731 Trre-Chr15 46391564 46394089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03731 435 646 Receptor kinase-like Gene Family AT2G21480 53.817 4.02e-81 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre15g03731 Malectin_like 9.8e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03731 - - mtr:25493508 498.434