Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03724 ATGGTGCTGATTGATGATAAGGGTGCCAAGATCCATGCTTCTATTAAGAAGCAGCTATTGTATATGTTTGATTCCAAGATTGTAGAAGTTTGTAGTCATACCCATGACTATGAATTTCTGGTTGATGTTATTGGCCTGATGACTGGGATTTCTGCGGAAAGGGAATACATAAGGGATGGAAAGATTACCAAGATGGTTATTGTTGAGTTAATTGATGCTAGTGGTAAATGTGAATGTGCTTTGTTTGGTGACTATGTCACTGAGTTGAACAAGAAAATGGGGAAGGCTGATGAAGGGCTTCCAGTGATTGTTGTTCAGTTTGCAAAAATCAAGATATTCAGAGATCAAGCATCTATTCAAAATGTAATCAATACCACCAGGATTTTCATAAATCCTGAGATCCCCGAGGCTGTTGAGTTTAAAAATAGCATCGCTCTGCATGGGATTGATATGGAATCCTTTATTCCTGTGATTGGAGGGAGGGCTAAACCTACTATGGAAGAAGAGTTTCTTCGTATGCACCCAAAAAAGAAAGTTTCTGATCTCAGTGACTTGGAGGAAGAGGGAATATTTGCTGTATATGGAGTTGTATCTGGAATAGTTCAAGGTGAAGACTGGTGGTACCCAGCCGTCAAGTGTCATAAGGCTGTGCTTCCTGATTCTGGTGCTTACTACTGCAATGGATGCTCCCGACATGTTTTCCAATGTATTCCTAGGTTCAGGGTTAAGGTTGAGGTATCGGATGGTGATTCAACATCTGTTTTTGTTCTATTTGATTCTGACATGAGTTATATACACGAGAAAGCGTGTGCTCATTTTGTTGGAAAAGCAAAGGTACCCAATGGAGGTTCAGTCCCGCCTGAGTTTGATTCATTGATTGGCTCTGAGGGCCCTTTCAATACTCCTGTAAAGCCAATGTCCCAGACAATTGAAATTAACTCTGACAATGACTTGGATGAAGTTGACATTGTCCGTGATTCGCAACCTCTCTCATTCCTGAAAGACATTATTGTCACTCCCCCTATTGATGCTAAGACCTCAGCTGAAGAGGATCCTTTGTTGTCTACTGTGAAGAGAAACTTGGTGGATCAGTTTGATGGCGTTTCAAAGGTACTTCTGGTGTTACTTTATGATAATCAAATGGATTTAATTCAAAGTACTCCTTTACAAAAGATGAAAGATTTCATTGGTCATTTAAATGTTAAGACACTTAGGGAATTATTAAAGAGTAATGATATTGGAGTATTTGTGGTCCTTGCTTCGTTTGTTTCTGTCGAAGAAGGTGTTGATGCTTGGTTCCCTGACGTTGGTGTCAATCCCAAGCTTAAGTTTAGAATGAAACTCAAGGTTGAAGATGGGCACGAATTTGCTATTTTCTCTCTGTATGATTGTGATGTTGAGTTCTTGGCTATGGAGACTTGCCCTGTGTTGCATTCCATGGGTGAATCTTGCTCATTGTTCCCTGATGAAATGGACTGTTACTTTGGGGATTCGATTCTGTATAAGGTTCAAAGGGATTGCTCTGTTTTGGATGAGAAGATTGCCCATTTTAAAGTTATTTCCATCTGCAATGAGGTTGCAGTTGTTGATAAATTCAGTGATGAGTACTTATCCAGTGATGAAAATATTGATCCGGTATCTAGTTTTGAGAAAACTATTAGTTCTTCTGGTGAGGAAAATTGTGGTTCCATTGTATTGCAAAGTAATGCTGCGTCTGAGAAAAAAATACCAGTTCATCTCGATGAATCAATTATCTCTCATGCTGGGATTTTGCACGCAAAATCGAATTCAAACCCACGGGACAACTGCGAGACTTTTGTTATTAATAGCACAAATACTGAGTCAACTCTAAGGGGGAAGGATGCTCAAATAAGCTCTTCACATGGTGGTCTCATACGCAGCACTTCTCTTGATATAGGGGTAGTCTAG 1929 0.3981 MVLIDDKGAKIHASIKKQLLYMFDSKIVEVCSHTHDYEFLVDVIGLMTGISAEREYIRDGKITKMVIVELIDASGKCECALFGDYVTELNKKMGKADEGLPVIVVQFAKIKIFRDQASIQNVINTTRIFINPEIPEAVEFKNSIALHGIDMESFIPVIGGRAKPTMEEEFLRMHPKKKVSDLSDLEEEGIFAVYGVVSGIVQGEDWWYPAVKCHKAVLPDSGAYYCNGCSRHVFQCIPRFRVKVEVSDGDSTSVFVLFDSDMSYIHEKACAHFVGKAKVPNGGSVPPEFDSLIGSEGPFNTPVKPMSQTIEINSDNDLDEVDIVRDSQPLSFLKDIIVTPPIDAKTSAEEDPLLSTVKRNLVDQFDGVSKVLLVLLYDNQMDLIQSTPLQKMKDFIGHLNVKTLRELLKSNDIGVFVVLASFVSVEEGVDAWFPDVGVNPKLKFRMKLKVEDGHEFAIFSLYDCDVEFLAMETCPVLHSMGESCSLFPDEMDCYFGDSILYKVQRDCSVLDEKIAHFKVISICNEVAVVDKFSDEYLSSDENIDPVSSFEKTISSSGEENCGSIVLQSNAASEKKIPVHLDESIISHAGILHAKSNSNPRDNCETFVINSTNTESTLRGKDAQISSSHGGLIRSTSLDIGVV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03724 642 CDD RPA1_DBD_B_like 42 141 - -
Trre15g03724 642 Gene3D - 24 152 IPR012340 -
Trre15g03724 642 SUPERFAMILY Nucleic acid-binding proteins 182 300 IPR012340 -
Trre15g03724 642 SUPERFAMILY Nucleic acid-binding proteins 36 151 IPR012340 -
Trre15g03724 642 Gene3D - 159 331 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03724 Trre-Chr15 46245195 46251230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03724 40 265 Core DNA Replication Machinery Family AT5G61000 25.941 1.40e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03724 - - tpra:123904946 395.201