Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03699 ATGGCTGTAGAAGATTTGAGTAGTGCTATTGTTGTTAATGTGAGAGAGTTTGATCCTAATAAAGATAAAGAGAGTGTTGAAGCCGTTGAAAAAATATGTGAAGTTGGTCCCAGTGGAAAACTTTCTCTCTTCACTGACTTGCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGGTTGCAGAGATAGACAATGAGATAGTTGGAATGATAAGAGGCTGCATCAAAACCGTTACATGCGGTAAAAAATTATCAAGACCAACAAAAAACACAAATGAACAAAATTCCAATCATGTCCCTGTCTTCACAAAACTAGCCTACATACTAGGTCTTCGAGTTTCACCAAATCATAGAAGAATGAGAATAGGTTTAAAACTTGTTCAAAAATTGGAACATTGGTTCAGAGAAAATGGTGCTGAGTATTCATACATGGCAACTGAAAACGACAACGTTGCATCCGTTAATCTTTTCACCGACAAATGCGGTTATTCTAAATTCCGTACACCGTCAATTCTTGTTAACCCTGTTTTCGCTCACCCTGTTAAAACGTCGTCGTCTAAAGTAACCATCATTAAACTTAACCCAAACGACGCCGAATTGATTTACCGTAACAAATTCTCCACCACTGAGTTTTTTCCTCGTGACATTGATTCTGTTTTGAAAAACAAACTCACTCTCGGAACTTTTCTCGCTGTTCCGAAAAATGGGCTTGGATTTGGGCCCAATAAGTGGAACTGGAACTGGACTGGCCCAGAGTCTTTTTTAATGGACCCACCGAGTTCTTGGGCTTTAATTAGTGTTTGGAACTGTAAAGATTTGTTTACTCTCGAAGTCAAAGGCGCGTCGCGCGTGAGACGGTTATTGGCTAAAACAACGCGTGTGATAGATAAAACTTTTCCTTGGTTACGGTTACCGTCGATTCCGAATTTTTTTGAACCGTTTGGATTTCATTTAATGTATGGAATTGGAGGGGAAGGACCGGAGGTGATGAAGATGGTGAAAGATTTGTGTGGTTTTGCTCATAATCTTGCTATGAAGAATGGTTGTAGTGCTGTTGCTACTGAGGTTTCGAGCTGTGATCCTCTACGGTTCGCTATTCCTCATTGGAAAGCTTTGTCCTGTGAAGAAGATTTGTGGTGTATTAAGAGATTAGGTGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCTAAACCTGAATTCTCCATTTTTGTTGATCCTAGAGAGTTTTAA 1254 0.4003 MAVEDLSSAIVVNVREFDPNKDKESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIDNEIVGMIRGCIKTVTCGKKLSRPTKNTNEQNSNHVPVFTKLAYILGLRVSPNHRRMRIGLKLVQKLEHWFRENGAEYSYMATENDNVASVNLFTDKCGYSKFRTPSILVNPVFAHPVKTSSSKVTIIKLNPNDAELIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAVPKNGLGFGPNKWNWNWTGPESFLMDPPSSWALISVWNCKDLFTLEVKGASRVRRLLAKTTRVIDKTFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEVMKMVKDLCGFAHNLAMKNGCSAVATEVSSCDPLRFAIPHWKALSCEEDLWCIKRLGEDYSDGSVGDWTKSKPEFSIFVDPREF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03699 417 Gene3D - 45 174 - -
Trre15g03699 417 FunFam Probable N-acetyltransferase HLS1-like 21 175 - -
Trre15g03699 417 Pfam Acetyltransferase (GNAT) family 58 168 IPR000182 GO:0016747
Trre15g03699 417 CDD NAT_SF 63 146 - -
Trre15g03699 417 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 187 IPR000182 GO:0016747
Trre15g03699 417 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 170 IPR016181 -
Trre15g03699 417 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03699 Trre-Chr15 45740104 45741533 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre15g03699 Acetyltransf_1 3.9e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03699 - - gmx:100775317 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03699 15 45740104 45741533 Trre15g03699 15 45740104 45741533 ECH
Trre9g00751 9 5637852 5639536 Trre15g03699 15 45740104 45741533 PCT