Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03695 ATGAAATCTCATCATCATTATTATCATTATCATTATCATTTCTTTTTTATCATATTCATATCATTATTCTCTCTAACTTCACTCACTCCACTTCCCAACAGAAGAATCCTACACCAACCGTTGTTAATTCCGGTTACTTCTGCTCCGCCGCCGGAATTCTCTCCGCCTCCTCCAGACATCACTCCTCCTTCACCTGACATTCCTTTTTTTAATGAAAATCCAACCGGACCGCCACCTCCGGTGGTGGCTACCAACAATCCGAATCTACCGTCGCCGTCAGTTGCTAACTCAACAATTGCAAATCCAACGGCGACGAAACCTACTAAACCTGCTAAGAAAGTTGCAATTGCGGTTTCAGTGGCATTTTCGATATTTGTCATGTTCTCCATTGTAGCTTTCTTCTTGTTTAAGCATAGAATGAAACACTCGTCGGAATCAGATAAACGGAAATTCGTCGGTGAGAATTTGAATAGAGTTCTAGAAGATTCCACGCGGGTTCCGCCACTACCACAATCATCATCATCGACAAATTTCCTCTACATTGGAACTGTGGTAGAGCCTAACGGTACGCCGGTAGGTGTGACTAACCCTCACAAGGTTAACCGTTACCGTCCGAGTCCCGAGTTGCATCCATTGCCGCCGCTTACGAAGTCTCTCGTCGTAGATAGTCAATCTCCACCGGCGGCGTCTTCGTCGTCGTCATCATCGGATAACGATGAAAGTCGCGACACGGCATTTCATTCGCCGGAAGAGTCTTCCTCACTCAATCTCAGCCGTGAAGACAATTTTTACACGCCGGTTTCCCGTCAAAGTTCTCTCGCAAACGGAAGTCCAAGCGCGCAGGTTACGGTAGCTCCGGTGGTTCCTTTTTCAAAGAGAACTTCGCCGAAATCTCGATTTTCTAGTTCTTCGCCGGTGATGATACCATCGATAAGTAGTGGTAGTGGTTCTTCTAGAAGGCCGAAATTCTCATCACCGCCACCGGCGCCGAATTTGACGCATCTTCATTCAAATGACTCCATAGCTTCACTTAACCTTCCTCCTCCGCCACCACCTCCGCCATTACCGAGAAATGGTTGGTTGCCGGCAGTTAGTGCACCATCATCCTCTGTTTCAAGGAAGCATCAACGGTCTCATTCTTCAATTCATGAAGCAGATTCTGCATCTGGTAACAGTTTGAATGTTAAGAAAGCTTTGAAAGAAGATGATGAAATAGAATTTGATGAAGGAAATGGAAAACCTAAATTGAAAGCTCTTCATTGGGATAAAGTTCGTGCTACTTCAGATCGTGCTACTGTATGGGACCAATTAAAATCAAGCTCATTTCAGTTAAATGAGGACATGATGGAGACACTGTTTGGTTGTAATTCATCAAATATTCCACCTAAAGCTAAAGAGATGTCTGTTACCAGGAAACCAGTTTTTGCTACTGTTGAACATGAGAATAGGGTGTTAGATCCTAAGAAATCACAAAATATAGCTATATTACTCAGGGCATTGAATGTCACAAGAGATGAGGTTTCTGAAGCTCTTTTAGATGGGAATCCTGCAGGTTTGGGTGCTGAGTTATTTGAAACTCTAGTGAAGATGGCTCCTACAAAGGAGGAGGAGATAAAACTAAAAAATTATGATGGTGACCTTTCAAAACTTGGTCCTGCAGAAAGATTTCTTAAGCAAGTGCTTGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGTTGTACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTACGAAATCCTTTCAATCCCTCGAGGCAGCAAGTGAGGAATTAAAGAACAGCCGCTTATTCCTCAAACTCCTTGAAGCTGTTCTCATGACAGGTAACAGAATGAATGTTGGAACCAATCGCGGCGGTGCTAAATCTTTCAAACTGGACACACTCTTGAAACTTGCAGATATAAAAGGAACAGATGGAAAGACAACATTGCTCCATTTTGTTGTGCAAGAGATTATTAGATCTGAAGGCACGGGTGCTGAATCCACAAATGAGAATGTTCAAAACCAAACAAATCCACAGTTCAATGAGGATGAGTTCAGAAAGAAAGGATTACAGGTTGTGGCTGGATTGAGTAGAGACTTTGGTAATGTAAAAAAGGCGGCAGGAATGGACTCGGATGTCTTAAGCAGCTATGTTATAAAACTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATGTAAAACCAGATATGCAAGGAAATTTCTTTAACTCAACAGAGACATTTTTGAAAGATGCTGAAGAGAAAATATTAAAGATCAAGGCTGATGAGATAAGGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGAGATACAACAAAGGAAGAAGCTCACCCTTTCAGAATTTTTATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTATGCAAAGAAGTGGGAAGAATGCAGGATAGAACTTCAATCGGTTCAGCCAGATCGTTCAGAATAGCCGCAAATGCATCGTTACCTGTTCTCAACAGGTACCGTGCAAGACAAGATACAAGTTCAGATGACGAAAGTTTATCCCCCTAG 2577 0.4191 MKSHHHYYHYHYHFFFIIFISLFSLTSLTPLPNRRILHQPLLIPVTSAPPPEFSPPPPDITPPSPDIPFFNENPTGPPPPVVATNNPNLPSPSVANSTIANPTATKPTKPAKKVAIAVSVAFSIFVMFSIVAFFLFKHRMKHSSESDKRKFVGENLNRVLEDSTRVPPLPQSSSSTNFLYIGTVVEPNGTPVGVTNPHKVNRYRPSPELHPLPPLTKSLVVDSQSPPAASSSSSSSDNDESRDTAFHSPEESSSLNLSREDNFYTPVSRQSSLANGSPSAQVTVAPVVPFSKRTSPKSRFSSSSPVMIPSISSGSGSSRRPKFSSPPPAPNLTHLHSNDSIASLNLPPPPPPPPLPRNGWLPAVSAPSSSVSRKHQRSHSSIHEADSASGNSLNVKKALKEDDEIEFDEGNGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSSNIPPKAKEMSVTRKPVFATVEHENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPAGLGAELFETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKQVLDIPLAFKRVEAMLYRANFETEVNYLTKSFQSLEAASEELKNSRLFLKLLEAVLMTGNRMNVGTNRGGAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGAESTNENVQNQTNPQFNEDEFRKKGLQVVAGLSRDFGNVKKAAGMDSDVLSSYVIKLEMGLDKVRLVLQYVKPDMQGNFFNSTETFLKDAEEKILKIKADEIRALFLVKEVTEYFHGDTTKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTSIGSARSFRIAANASLPVLNRYRARQDTSSDDESLSP 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03695 858 PANTHER FORMIN-RELATED 15 852 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre15g03695 858 MobiDBLite consensus disorder prediction 292 393 - -
Trre15g03695 858 MobiDBLite consensus disorder prediction 189 259 - -
Trre15g03695 858 MobiDBLite consensus disorder prediction 218 239 - -
Trre15g03695 858 Pfam Formin Homology 2 Domain 411 807 IPR015425 -
Trre15g03695 858 Gene3D Formin, FH2 domain 414 834 IPR042201 -
Trre15g03695 858 SMART it6_source 406 822 IPR015425 -
Trre15g03695 858 SUPERFAMILY Formin homology 2 domain (FH2 domain) 347 820 - -
Trre15g03695 858 MobiDBLite consensus disorder prediction 294 322 - -
Trre15g03695 858 MobiDBLite consensus disorder prediction 344 360 - -
Trre15g03695 858 ProSiteProfiles Formin homology-2 (FH2) domain profile. 406 833 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03695 Trre-Chr15 45660185 45664100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03695 381 848 FH2 protein (formin) Gene Family AT5G67470 69.427 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03695 - - gmx:100803578 922.924