Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03694 ATGATACGTATCAATGCCATTGACCACATTTTCAAGATACAGGAAAAACTTGGATTCAAGATATGTACAGCTTATTTATCAGTGACATACTTTGATCAGTTTCTTTTGAAGCAACAGAAACAAATCTATGAAGAGAGGTATGTTCAGATATTATCTGTGGCGTGCTTGTCTCTTGCTGCGAAAATGATGGAAGAGCGTGATCTACCCCTTCTATTTAAATACATAACGGAAATATACGAAGAGCAAAATTTTGTTGACAAGCAATGTATTGGGGAGATGGAGGCGGATGTTTTTAGTACAATGGAATGGGAATTGACAACTGTCACTCCTTTTGATTTTCTGCATTACTTTGTTTACTTGTTCTGCCCTGAATCTCCACCGGAACCATTGATCTCACAAGCTGTAGAACATGTTTTGACTATCCTGAAAGATGTTAATTTGATGGATCATAGGCCATCCACTATTGCCTTGGCTGCCACATTGATGGTGTCTTATGATGCTGCATTAACAAGAGAGATCATGGATCTGCAGATAGGTGAAATCTTACTGCAGCTAAATTTAGACAGAGAAGGTGTGTTTTTCTGTTACCATCTAATGCAGGAAAAATGTACTGGGAGAGTAAAGTTAAACAACCCTGCCTCAACTTTGACAGCTCAATGGAGCTACACATATGTTCTTGACCATTCTTCTGTTACTTCTTCTACAGTTATGAGAAAGCTTGGTTTTGACAATAAAGAAAATTTTCATAGCCAAAGATCAAATTGTCCTTAG 771 0.3761 MIRINAIDHIFKIQEKLGFKICTAYLSVTYFDQFLLKQQKQIYEERYVQILSVACLSLAAKMMEERDLPLLFKYITEIYEEQNFVDKQCIGEMEADVFSTMEWELTTVTPFDFLHYFVYLFCPESPPEPLISQAVEHVLTILKDVNLMDHRPSTIALAATLMVSYDAALTREIMDLQIGEILLQLNLDREGVFFCYHLMQEKCTGRVKLNNPASTLTAQWSYTYVLDHSSVTSSTVMRKLGFDNKENFHSQRSNCP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03694 256 Pfam Cyclin, C-terminal domain 108 218 IPR004367 -
Trre15g03694 256 PANTHER CYCLINS 7 201 IPR039361 -
Trre15g03694 256 CDD CYCLIN_AtCycD-like_rpt2 108 199 - -
Trre15g03694 256 Pfam Cyclin, N-terminal domain 3 105 IPR006671 -
Trre15g03694 256 SUPERFAMILY Cyclin-like 2 105 IPR036915 -
Trre15g03694 256 Gene3D - 107 170 - -
Trre15g03694 256 Gene3D - 3 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03694 Trre-Chr15 45658263 45659423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03694 3 212 Core Cell Cycle Gene Families AT1G70210 33.175 1.36e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03694 K18811 - gmx:100808000 209.534