Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03663 ATGGGACAGCTGAGTCATCCTAATCTTGTGAAATTGATTGGTTATTGCTTAGAGGATGATTACCCCATTTTGGTATATGAATTTTTGGCCAATGGAAGTTTGGACAATCATTTGTTTAAAGGGTCATCTAACATTCAGCCACTCTCTTGGCCAGTCAGAATGAAGATAGCTCTTGATGCTGCCAAGGGTCTGGCATTTCTTCACAGTAATGAAGTCCAAGTGATGCACGGTGATTTCAAAACTTGTAATATCTTGATTGATTCTAACCACAACGCAAAACTATCCGATTTTGGGTTGGATAAACTTAGAGATGAAGAAGGTGATGCGCATTCGAGTTGGACTAGGGTATTTATGTGCCCCCAACCCCAAAGATACGCAGCACCTCATCATATAACAGCAGGTAAACAAACCAAAATGAGTGACATATACAGTTTTGGAGTTGTTCTGCTTGAAATTATGTCTGGCAAATGGGCACATGCTAAAAATTGGCCACGATGCGAACGCAGTTTATTTAAATCAGACAAGGCAGAGCCATTACTCATCAACAAAGACAAGCTCTTCCAATTTATGGATTCTTATTTAGAAGGTCAATATTCGCCGCGTGAGGCAATCAAAGTAGCTAGCATTGCAATTCATTGTCTGTCAAGTAATCCAAAAAATAGACCAAACATTAATGAAGTGGTGAGATCATTGGAACAACTATAG 705 0.3943 MGQLSHPNLVKLIGYCLEDDYPILVYEFLANGSLDNHLFKGSSNIQPLSWPVRMKIALDAAKGLAFLHSNEVQVMHGDFKTCNILIDSNHNAKLSDFGLDKLRDEEGDAHSSWTRVFMCPQPQRYAAPHHITAGKQTKMSDIYSFGVVLLEIMSGKWAHAKNWPRCERSLFKSDKAEPLLINKDKLFQFMDSYLEGQYSPREAIKVASIAIHCLSSNPKNRPNINEVVRSLEQL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03663 234 SUPERFAMILY Protein kinase-like (PK-like) 1 231 IPR011009 -
Trre15g03663 234 Pfam Protein tyrosine and serine/threonine kinase 1 231 IPR001245 GO:0004672|GO:0006468
Trre15g03663 234 Gene3D Transferase(Phosphotransferase) domain 1 33 234 - -
Trre15g03663 234 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03663 234 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Trre15g03663 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Trre15g03663 234 PANTHER OS01G0588500 PROTEIN-RELATED 1 233 - -
Trre15g03663 234 PIRSF ILK 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03663 Trre-Chr15 45275201 45277368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03663 1 231 Receptor kinase-like Gene Family AT3G58690 42.979 1.11e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre15g03663 PK_Tyr_Ser-Thr 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03663 - - mtr:25489291 281.182