Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03662 ATGCTGGCTGGCCTAAGTAGTTGTTTGAAATGGACAGGTTTGAATTATTCAAAGCTTGATGGTAAAGAAGATGATGTGTTATATATGCAGACTATGCTTCAAACTTGTACCACTTTGAAGTGCTTTGCATTAAAGGAAATACAAACTGCGACAATGAATGTGATTCCAGATAGTCAGGAAGGTGAGTTTTGCTGTTTAAAGGGATGGGTCGATGCGCATACATTAGCCCCCACTAAACCAGATTCTGGTTTAGCAATTTCTGTGAAGAAGCTTAACCATGTGACCCACCAGGAACGCAGTGAATGGTTGAGAAAAATCAACAACATGGGACAGCTGAGTCATCCTAATCTTGTGAAATTGATTGGTTATTGCTTAGAGGATGATTACCCCATTTTGGTATATGAATTTTTGGCCAATGGAAGTTTGGACAATCATTTGTTTAAAGGGTCATCTAACATTCAGCCACTCTCTTGGCCAGTCAGAATGAAGATAGCTCTTGATGCTGCCAAGGGTCTGGCATTTCTTCACAGTAATGAAGTCCAAGTGATGCACGGTGATTTCAAAACTTCTAATATCTTGATTGATTCTGTAAGTGGGTTTATTGATCTTACAAGCTTAGAGATGAAGAGTTTATGTTGA 639 0.3912 MLAGLSSCLKWTGLNYSKLDGKEDDVLYMQTMLQTCTTLKCFALKEIQTATMNVIPDSQEGEFCCLKGWVDAHTLAPTKPDSGLAISVKKLNHVTHQERSEWLRKINNMGQLSHPNLVKLIGYCLEDDYPILVYEFLANGSLDNHLFKGSSNIQPLSWPVRMKIALDAAKGLAFLHSNEVQVMHGDFKTSNILIDSVSGFIDLTSLEMKSLC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03662 212 Gene3D Phosphorylase Kinase; domain 1 28 136 - -
Trre15g03662 212 ProSiteProfiles Protein kinase domain profile. 52 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03662 212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Trre15g03662 212 Gene3D Transferase(Phosphotransferase) domain 1 137 207 - -
Trre15g03662 212 PANTHER OS01G0588500 PROTEIN-RELATED 37 196 - -
Trre15g03662 212 Pfam Protein tyrosine and serine/threonine kinase 74 196 IPR001245 GO:0004672|GO:0006468
Trre15g03662 212 SUPERFAMILY Protein kinase-like (PK-like) 81 196 IPR011009 -
Trre15g03662 212 SMART tyrkin_6 52 211 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03662 Trre-Chr15 45253132 45254127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03662 22 195 Receptor kinase-like Gene Family AT5G48740 37.143 1.13e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre15g03662 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03662 - - mtr:25489291 246.128