Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03654 ATGCTCTCCACCCTCCCTCCCTCCGACCCTTTTCTTGACAACCCATTCTCCGCCTTCTCCGCCGGTTTTCCGCCATGGGATTTCCACGACCTTTTCTCCGACGACATCAAACCCATCACTCCCTTACTCATCACTTCAAGTTCCGGTTCAGATGAACCGAACCAACCCCATGAGAAACGTAAACCGGACTCAGACCGGGTCATCGACGAGCGAAAGAGGAGACGAATGATTTCGAACCGGGAATCGGCCCGAAGATCACGGATGCGTAAACAGAGACATGTTGAGAATCTAAGGAACCAGTTGAACAAGTGTAGACTCGAAAACCGGGAAATGAAAAACCGGTTGCAATTCATTTTGTATCACTTGAACCGGATAAGAACCGAAAATGAATGGCTCCGGTCTGAGCGAACCGTGCTGAACCAAAAAATCAACAACTATACTCAAATTTTGGTTTACCAACAGTTTCAACCTTTCTCTCCTGCGTGGACGTGTAATACTACTACGGTGGAATAA 513 0.4776 MLSTLPPSDPFLDNPFSAFSAGFPPWDFHDLFSDDIKPITPLLITSSSGSDEPNQPHEKRKPDSDRVIDERKRRRMISNRESARRSRMRKQRHVENLRNQLNKCRLENREMKNRLQFILYHLNRIRTENEWLRSERTVLNQKINNYTQILVYQQFQPFSPAWTCNTTTVE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03654 170 SMART brlzneu 67 131 IPR004827 GO:0003700|GO:0006355
Trre15g03654 170 MobiDBLite consensus disorder prediction 53 84 - -
Trre15g03654 170 Coils Coil 80 114 - -
Trre15g03654 170 SUPERFAMILY Leucine zipper domain 71 119 IPR046347 GO:0003700|GO:0006355
Trre15g03654 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 69 132 IPR004827 GO:0003700|GO:0006355
Trre15g03654 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 37 153 - -
Trre15g03654 170 FunFam BZIP transcription factor 69 120 - -
Trre15g03654 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 74 89 IPR004827 GO:0003700|GO:0006355
Trre15g03654 170 Gene3D - 69 119 - -
Trre15g03654 170 CDD bZIP_plant_GBF1 72 119 IPR045314 GO:0003700|GO:0006355
Trre15g03654 170 MobiDBLite consensus disorder prediction 43 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03654 Trre-Chr15 45095196 45095708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03654 1 165 bZIP Transcription Factor Family AT2G22850 34.529 2.40e-32 113