Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03643 ATGGACTGTATGCCTCTTTGTAATTACAGATTACCAACACCTGAAGAAAGAGAAAAATGGAAACACATTTTTGACACTACCATAAATCCAAATCTGGTACCAATTGAAATCCCTCAGCCTTTTTTCAACAAAATGAAAAGTGAGTTTATAAAGCACACATTTGGTTGGATCAGGGGTCCCAAAAAAATGAAATTCATGGTTAGATATCTCCAATCCAATAGTGGTATCAAGCTCTCCTCTGGAGTGTGTGTTTCTCGATATTTTGGATTTGCTGTACCAACAAGGGTGACACTTAGCTATGTGATTGACGAGAATACTTTTTGGATGAGAATTTACTCTCCACTTCAACCTGTGAAAACTGAATTTCCACCAGAGGAAACTTTGAAAAGGAAGCATCAAAATGATGATCAAGATGAGCCAAATTCCAAGAGGTGCAAGAGACCTAAAGCCAACAAACAAGCTGTGTATTTGAAGTCCCCCCCTCCATGTCAAAATTCCAAGAATAATGATGATCAAGATGAGCCAAATTCCAAGAGGTGCAAGAAACCTAGAGGCAACAAACAAGCTGTGTCTTTGAAGTCCCCCCCTCCATGTAAAAAACAGAAAATTCTGAAGTCTACCCCAAAGGAATTAAGCAAACAACGACACCCAAATTTGAAGATTCGTGCATCTGAGAGAAAAAAATATTTGAAGTCCACACCAAAGAAATCAAACAAACAACATCAGTCTAAGCATTCAAGGAAACCAGTAATTGTAAAGCTGAATCCTGATGGAAGCTATAGTTGGGAGAAGATTGTAACTACAGCTGCTGCAGCTGATGCAAGACCTCAAGTCATGCATTTTCCTAAGCAATTGTCTACATTGTTTTTGGAAGAAAAACAAAACAAGATGTTGGTCGAAGCTGGAGCAGGAGATACATTCTCTTGCAAGCTTATTACAGCGGGAAGGAATGCAGCTGAAAAATATATATCAAAAGAGTGGTCCAAATTTGTGCGAAGAAACAACCTCCAAGCTGGAGACAAGCTCATTTTCACTCTTCAGAACCCACCAACAAAACTCCTGATTCAGATCATCCGTTGTAGTGCTCACGACTGA 1095 0.3927 MDCMPLCNYRLPTPEEREKWKHIFDTTINPNLVPIEIPQPFFNKMKSEFIKHTFGWIRGPKKMKFMVRYLQSNSGIKLSSGVCVSRYFGFAVPTRVTLSYVIDENTFWMRIYSPLQPVKTEFPPEETLKRKHQNDDQDEPNSKRCKRPKANKQAVYLKSPPPCQNSKNNDDQDEPNSKRCKKPRGNKQAVSLKSPPPCKKQKILKSTPKELSKQRHPNLKIRASERKKYLKSTPKKSNKQHQSKHSRKPVIVKLNPDGSYSWEKIVTTAAAADARPQVMHFPKQLSTLFLEEKQNKMLVEAGAGDTFSCKLITAGRNAAEKYISKEWSKFVRRNNLQAGDKLIFTLQNPPTKLLIQIIRCSAHD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03643 364 MobiDBLite consensus disorder prediction 203 231 - -
Trre15g03643 364 Pfam B3 DNA binding domain 279 359 IPR003340 GO:0003677
Trre15g03643 364 MobiDBLite consensus disorder prediction 232 248 - -
Trre15g03643 364 Gene3D - 186 362 IPR015300 -
Trre15g03643 364 MobiDBLite consensus disorder prediction 122 249 - -
Trre15g03643 364 MobiDBLite consensus disorder prediction 123 146 - -
Trre15g03643 364 CDD B3_DNA 279 359 IPR003340 GO:0003677
Trre15g03643 364 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 125 360 IPR044837 -
Trre15g03643 364 ProSiteProfiles B3 DNA-binding domain profile. 264 361 IPR003340 GO:0003677
Trre15g03643 364 SUPERFAMILY DNA-binding pseudobarrel domain 271 359 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03643 Trre-Chr15 44914840 44916372 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre15g03643 B3 2.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03643 - K12567 tpra:123904760 204.142