Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03635 ATGTATATGATGATACATAATAGAATGTCTTTTGAAAGATTACAAAGGGAACGGGCTGAAAGAAAAAGTACAAGAACATTCCACACATGCGTTTATCCAAACGAGCGTGAAATTGAGCTTTGTCCAAGATTCAAGAATGCTTGGATTAACGACCTGCAAAGACATTCCGTTGGATGGCTTCTACATCCGGATGGACGGTCACTACCAATTGCTGTAAATGTTGATGGGAGTGATTGTTACATATCTAATGGCAGGTTTGTCTCCTCTAATTTGGGTTTTAGAGAGCCTACCAAAATCATCCTGACATATGAGGTATTTGAAAACCGCTTCCGAATGACTGTTGTAAAGAATGGAGCAACTGAGATCTTGCCAACTGATGAGCCAGATGATGACTGTGTGGTTATTCCAAATCCTGAAGGCTATCAACCTGTTGAAACGATTGCCAATGAAGAAGTCGAGGACTATGTGAATGTTTCAAATTTTGGAGAATTTCTCACTGGTGCCATGAGAAAATTCCCTGCATTCAATGATGATCGAAAGTTTGGTTGGAGGCTTACTATCAGTCATGCTTATGCTACTTCTACTAAGCATCAGGTTTGGCATATTCCAGCGGACACTGTTAAGCAAGTTCTTAAAAATAGGAAGAGCATTGTGATTAGAACTCCCCACAAGTTGGATGGGATCAAGTGCAACATAGTCACCTACAAAAGGAAACCAGGGAAGATGAAGATGTATCTTAGCAAGGGTTGGTTTGAGTTCATGAGAGCTAACAGTTTGAGGGAGGGAGATGTATTAGAATTTCAACTTTCAGATCCGCCCGAAGCTGTGGCTGTGGACATTATTCGAGGAAGCAGTTGA 858 0.4103 MYMMIHNRMSFERLQRERAERKSTRTFHTCVYPNEREIELCPRFKNAWINDLQRHSVGWLLHPDGRSLPIAVNVDGSDCYISNGRFVSSNLGFREPTKIILTYEVFENRFRMTVVKNGATEILPTDEPDDDCVVIPNPEGYQPVETIANEEVEDYVNVSNFGEFLTGAMRKFPAFNDDRKFGWRLTISHAYATSTKHQVWHIPADTVKQVLKNRKSIVIRTPHKLDGIKCNIVTYKRKPGKMKMYLSKGWFEFMRANSLREGDVLEFQLSDPPEAVAVDIIRGSS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03635 285 Gene3D - 168 284 IPR015300 -
Trre15g03635 285 ProSiteProfiles B3 DNA-binding domain profile. 233 284 IPR003340 GO:0003677
Trre15g03635 285 CDD B3_DNA 202 282 IPR003340 GO:0003677
Trre15g03635 285 Pfam B3 DNA binding domain 198 282 IPR003340 GO:0003677
Trre15g03635 285 SUPERFAMILY DNA-binding pseudobarrel domain 198 273 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03635 Trre-Chr15 44862326 44863654 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre15g03635 B3 3.6e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03635 - K15726 tpra:123886203 189.504