Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03597 ATGCTCCCTCTTCTCTCATACCTCATTTTCCTTCTCCTCTTCACATTCAACTCAGTTTCCACAACACACATAATCTCAGAATACCACACATTACTATCATTCAAATCATCTTCCATAACTAACGACCCAACAAATATCCTCTCCTCATGGAACCCAAAAACACCATACTGTTCCTGGCACGGCATAACATGTGGCCAACACCGCCACGTCATCTCCATCAACCTCTCTTCTCTCACTCTCACTGGAACACTTTCCGACGACATTTCCAATCTCCCTTTTCTCACTAACCTTTCTCTCGCCGACAACAAATTCTCTGGCCCAATTCCCTCTTCTTTCTCATCTCTCATTTCTCTTCGTTACCTTAACCTCTCCAACAATGTCTTCAATGGTACTTTTCCTTCTCAGCTCTCTAATCTCTTCAATCTTCAAGTTCTTGATCTCTACAATAACAACATGACTGGTACTCTTCCACTTTCTGTTACTAAAATGAGTTTTCTTCGTCATTTGCATCTGGGTGGGAATTTTTTCACCGGAAAAATTCCGTCGGAGTATGGTTTTTGGACTCATCTTGAATATCTTGCTGTTTCTGGTAATGAGCTTTCTGGACCCATTCCGCCGGAGATCGGTAATCTTACTTCGCTTAAAGAGCTTTACATTGGTTACTATAATACCTACGACGGTGGTATTCCGCTGGAGATTGGTAACTTATCGGAGCTGGTGAGGTTTGATGCTGCTTACTGTGGTTTAACCGGTGAAGTTCCGGCGGAGTTGGGTAAGCTTCAAAAGTTAGATACTTTGTTTCTTCAAGTGAATGCACTTTCTGGGTCACTTACGCCGGAGCTCGGAAACTTGAAAAGCTTGAAATCTATGGATTTGTCTAACAACGCTTTCTCCGGTGAAGTTCCGGCGAGTTTTGCTGAGCTGAAAAATCTTACCCTTTTGAATCTTTTTAGAAATAAACTTCATGGTGCTATACCGGAGTTTATCGGCGAGATGCCGGCGCTTGAAGTGTTGCAGATTTGGGAGAATAACTTCACTGGAAGTATTCCTCAGAATTTAGGGAAGAATGGAAAACTTACACTTGTTGATGTTTCTTCAAACAAGTTAACTGGTTCACTTCCTCCTAATATGTGTTTTGGGGATAAGCTTCAAACTTTAATAGCTTTAGGGAATTTTCTTTTTGGTCCTATTCCAGATTCACTTGGAAAGTGTAAATCTTTAAGTAGAATTAGAATGGGTGAGAATTTTCTAAATGGGTCAATTCCAAAAGGACTTTTTGGTCTTCCAGAACTTACACAAGTTGAGCTTCAAGATAATCTTTTATCAGGAAACTTTCCTCAACCTGTTTCAATGTCTCCAAATCTTGGTCAAGTTACTCTTTCCAACAATAAACTTTCTGGTCCATTACCACCTTCCATTGGGAACTTCACAAGTGTTCAAAAGCTTCTTCTTGATGGGAATCAGTTTTCAGGTAAAATCCCTTCTGAGATTGGAAAGTTGCAACAGCTTTCAAAGATTGATTTTAGTCATAATAAATTCTCTGGTCCTATTGCTCCTGAGATTAGTCATTGTAAGCTTTTAACTTTTGTTGATCTTAGCCGAAACAATATTTCGGGTGAGATTCCAAAGGAAATTACTAGCATGAGGATATTGAATTACTTGAACCTTTCAAGGAATCATCTTGTTGGTACTATTCCAGGTTCTATTGCTTCAATGCAAAGCTTAACTTCTGTTGATTTTTCATATAATAATCTAACTGGTTTGGTTCCTGGTACTGGCCAATTTAGTTACTTTAACTACACTTCTTTCCTTGGTAACCCTGAACTTTGTGGACCTTATTTGGGTCCTTGCAAAGATGGTGTTGCTAATGGTCCTCACAAACCTCATGTTAAAGGACCATTATCTTCTACTGTGAAGCTTTTGCTTGTTATTGGATTGCTTGTGTGTTCTGCTGTGTTTGCTGTTGCTACAATTTTCAAAGCTCGGTCTTTGAAAAAGGCTAGCGAAGCTCGTGCGTGGAAACTAACCGCATTCCAGCGTTTGGACTTCACGGTTGATGATGTTCTTGATTCCTTGAAAGAGGATAATATCATAGGAAAAGGTGGTGCTGGCATTGTTTACAAAGGTGCAATGCCTAATGGTGATCTTGTTGCGGTGAAAAGGTTACCGGCTATGAGTAGAGGATCTTCACATGATCATGGTTTTAATGCTGAGATTCAAACTTTAGGCCGGATTCGACACCGACACATTGTTAGATTATTAGGATTCTGTTCAAACCACGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTACTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGATACAAGGTACAAAATTGCTGTGGAATCTGCAAAGGGTCTTTGTTATCTTCATCATGATTGTTCACCTCTTATTGTTCATCGTGACGTAAAATCAAACAATATCTTACTTGATTCGAGTTTTGAAGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATTCTGGTACTTCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACATTGAAAGTCGATGAAAAAAGCGACGTCTACAGCTTCGGAGTGGTACTCCTAGAGCTCGTAGCAGGGCGAAAACCAGTTGGAGAATTCGGCGATGGAGTTGACATTGTACAATGGGTTAGAAAAATGACAGATTCAAACAAAGAAGGTGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCGGTTCCACTGCACGAAGTTATGCATGTGTTCTATGTAGCAATGTTATGTGTTGAAGAACAAGCGGTAGAAAGACCAACCATGCGCGAAGTCGTTCAAATGCTTACTGAACTTCCAAAACCATCACCTAGCTCAAAACATGTTGAAGAAGACTTAACAATGTTAACAATCACTGAATCTTCTTTGTCTTCATCAAACAGTTTAGAGTCTCCAGAAAAAGATCCTAAAGATCTTCTTAGTATATGA 3030 0.3974 MLPLLSYLIFLLLFTFNSVSTTHIISEYHTLLSFKSSSITNDPTNILSSWNPKTPYCSWHGITCGQHRHVISINLSSLTLTGTLSDDISNLPFLTNLSLADNKFSGPIPSSFSSLISLRYLNLSNNVFNGTFPSQLSNLFNLQVLDLYNNNMTGTLPLSVTKMSFLRHLHLGGNFFTGKIPSEYGFWTHLEYLAVSGNELSGPIPPEIGNLTSLKELYIGYYNTYDGGIPLEIGNLSELVRFDAAYCGLTGEVPAELGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNAFSGEVPASFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQIWENNFTGSIPQNLGKNGKLTLVDVSSNKLTGSLPPNMCFGDKLQTLIALGNFLFGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPELTQVELQDNLLSGNFPQPVSMSPNLGQVTLSNNKLSGPLPPSIGNFTSVQKLLLDGNQFSGKIPSEIGKLQQLSKIDFSHNKFSGPIAPEISHCKLLTFVDLSRNNISGEIPKEITSMRILNYLNLSRNHLVGTIPGSIASMQSLTSVDFSYNNLTGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPHKPHVKGPLSSTVKLLLVIGLLVCSAVFAVATIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVESAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPSPSSKHVEEDLTMLTITESSLSSSNSLESPEKDPKDLLSI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03597 1009 MobiDBLite consensus disorder prediction 987 1009 - -
Trre15g03597 1009 SMART LRR_typ_2 284 307 IPR003591 -
Trre15g03597 1009 SMART LRR_typ_2 115 139 IPR003591 -
Trre15g03597 1009 SMART LRR_typ_2 308 332 IPR003591 -
Trre15g03597 1009 SMART LRR_typ_2 572 595 IPR003591 -
Trre15g03597 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 85 328 - -
Trre15g03597 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 382 964 - -
Trre15g03597 1009 ProSiteProfiles Protein kinase domain profile. 692 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03597 1009 SMART serkin_6 692 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03597 1009 SUPERFAMILY RNI-like 72 391 - -
Trre15g03597 1009 Pfam Protein kinase domain 694 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03597 1009 SUPERFAMILY Protein kinase-like (PK-like) 685 963 IPR011009 -
Trre15g03597 1009 Pfam Leucine rich repeat 94 151 IPR001611 GO:0005515
Trre15g03597 1009 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Trre15g03597 1009 Gene3D Transferase(Phosphotransferase) domain 1 770 988 - -
Trre15g03597 1009 Gene3D Ribonuclease Inhibitor 222 379 IPR032675 -
Trre15g03597 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Trre15g03597 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 661 769 - -
Trre15g03597 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 336 621 - -
Trre15g03597 1009 Gene3D Phosphorylase Kinase; domain 1 657 769 - -
Trre15g03597 1009 Gene3D Ribonuclease Inhibitor 24 221 IPR032675 -
Trre15g03597 1009 Gene3D Ribonuclease Inhibitor 380 618 IPR032675 -
Trre15g03597 1009 SUPERFAMILY L domain-like 358 617 - -
Trre15g03597 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03597 Trre-Chr15 43664292 43667888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03597 17 1009 Receptor kinase-like Gene Family AT5G65700 78.636 0.0 1573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre15g03597 Pkinase 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03597 - - gmx:547592 1663.28