Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03568 ATGACTGATGAGGAAAAACAAGTTTCTTCAATTGACAACATCCATCCGAGGCTGGATGTCTATGTGTGGGACATGGATGAGACCCTTATACTGCTCAACTCTTTGCTGAAATCATCATATGCTGAGGCTTTCAACGGTCTGAAGGATGTGCAGAAAGGTGTTGAGCTCGGGAAGATGTGGGAAAATCTCATTTTGAAAGTGTGCGATGATCATTTCTTCTACGAACAAATTGAAAATTACAATCAGCCATTTCTTGATGTTCTGTCCAAATATGATGATGGGAGGGACCTATCTGATTACGACTTCAACCAAGATGAATTAGGCCCCCCACATGATGATGCCAACAAAAGAAAAATTGCATACAGGCATCGAATTATATCCCAAAAATACTTGCAGGGCTTACATAATATTTTAGATCACGAGACAATAAAAGTATGGGATGATTTGTATGAAAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCACGGACCTTTTTGAAGGAGTGTTCTGGTCAAAATAAAGATGCGGTATCTTCAATTGCTTATGCTAACACAAGCACTGACTCAACCAATGCAAAGCGTCAGCATGTAAATGTTTTAGTGACATCTGGATCGTTGATACCATCTCTTGTAAAATGCTTGCTCTTTCATCTGGACAGCTCAATAACACATGAAAATGTGTATAGCTCTTGGGATGTGGGGAAAGTTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCCAACGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTGAAGCTGCCGAAATCATGAGATGGCCATTTATTAAGATTGACCCTCGGCCAGGAAAACCTCATAGGTTCCCTGGCCTCACATCCAAAACAGTTGGCCACTATGTTTCTGTGGTGTATCCAGACAACGAGAATGATGAAGAATGA 939 0.4079 MTDEEKQVSSIDNIHPRLDVYVWDMDETLILLNSLLKSSYAEAFNGLKDVQKGVELGKMWENLILKVCDDHFFYEQIENYNQPFLDVLSKYDDGRDLSDYDFNQDELGPPHDDANKRKIAYRHRIISQKYLQGLHNILDHETIKVWDDLYEKTDEYTDKWLSSARTFLKECSGQNKDAVSSIAYANTSTDSTNAKRQHVNVLVTSGSLIPSLVKCLLFHLDSSITHENVYSSWDVGKVQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMRWPFIKIDPRPGKPHRFPGLTSKTVGHYVSVVYPDNENDEE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03568 312 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 19 279 - -
Trre15g03568 312 SUPERFAMILY HAD-like 17 286 IPR036412 -
Trre15g03568 312 Gene3D - 19 284 IPR038102 -
Trre15g03568 312 PANTHER EYES ABSENT 12 300 IPR028472 GO:0004725
Trre15g03568 312 SFLD Haloacid Dehalogenase 19 279 - -
Trre15g03568 312 FunFam Eyes absent homolog 19 288 - -
Trre15g03568 312 NCBIfam EYA conserved domain 19 296 IPR006545 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03568 Trre-Chr15 42959658 42962191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03568 3 310 Protein tyrosine phosphatase (PTP) family AT2G35320 57.143 2.09e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03568 - - tpra:123881555 615.535