Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03557 ATGGGAAGTGGAGTTTCGTCCCTCTGTTCTTGCTTTGAACCGGTTCACCGGACCAAAAAAAACCATAACCAAAACGTTATTTTCACTCAAGAAGAACCATTGGATGAAACCCTAGGTCACTCTTTCTGTTACGTTAGATCTTCAGCTCGTTTTCTCTCTCCGACTCGCTCCGATCGGTTTCTCTCTCCTTCAACTTCTCTCCGGTTTTCACCAACTCACGAATCGCTACCCAAAACCCGACCCGATTTTCCTGAAACCACTTTCAAAGCTATTTCTGGTGCTTCTGTTAGTGCTAATAGTTCTGTTCCCAAAACGGTTATTCAGTTAGAGGAAGAATCCTCAACCTCCGCCGCCGCCGTTTTTGATTCTTCCGTCAAGGGTACTATTGTCAATGGCTTTGAAAGTACGTCGTCGTTTTGTGCTCTTCCGCTTCAGCCTGTTCCCAGAGGTGCTGAGCTTTTTGAAGGGAGTGGTTTTTTTCTCTCCGGTCCGTTTGAGAGCGGCGCGCATTCCGGACCGATTAACGCAGGTGCTGGTGTTGACTCTGCTGTCTCCGGCGGGAGAGATGTTCCTTTCTCAGCTCCGTTAGGGGGGATGTATGGAAGGAAGAAAGGTGTGTCGGGGTTTCGGAAGGCGTTTCAACGGAAGGTGTCCGACAAGAAGCGGCCGTGGGTGGTGCCAGTGTTGAATTTTGTTGGGAGGAAGGAAGTTCCGGCGAGTGAAGGGAGGGAGAAGCCGGTGGAGGTGAAGAGTGAGAGCAATGTGCAGTGGATGTTAGGGAAGGCCGGTGAGGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTACGATGGTTTTAATGGACCCGATGCTCCGGAGTTTTTGATGGGTAATATGTACCGTGCTGTTTACAATGAGCTTCAGGGTTTGTTCTGGGAAGTTGAAGAAACAATGGAGAGTAATCCTGTTGAGGTGAAAAACAAAACGGAAGGAGAAAATTCCGGTGCTGGTTTGGTGAATGTGGTTCGCGAGGCTGAAACTGGAACCGTGAGTAAACGGCGTAGGTTGTGGGAGTTACTGGCGGAAGATCCTGAAGATGGACTTGATCTTTCCGGGTCTGATAGGTTTGCGTTTTCTGTTGACGACGCACTCAGTGTTAGCAATGCCAATGCAGGTTCTGCCATTAGTAGGCGGTGGCTTTTGCTGTCCAAACTGAAGAACGGGTTGTCAAAGCATAGGGAGGGTAATGGTAGGAAGTTGTTGCCGTGGAGTTTAGGGAATGAGGAAGAGAAAGAAGAAAAGTCTGAGGTGGAAAACAAGCCTTCTGCTTCTAGTACTGGCAGTGGTGGAGGGAGGAGACGGAAATTGGGTCCGGTCGATCATGATTTGGTTTTGAATGCAATGTCTCGGGCTCTTCAAGTGACAGAGCTTGCGTATTTGGATATGACGGATAAGCATTTGGATACAAATCCTGAACTTGCTTTGATGGGTTCTTGTCTGTTGGTTGTTTTGATGAGGGATGAGGATGTGTATGTTATGAATGTTGGGGATAGTCGTGCAATTGTTGCGCATTATGAGCCCAAGGAGGGTCAGGATACTTCCAACGTGGAACCTGCAAGCAAGGAACAAGATGTTGGTGTTGGTTCCAGCAGTGGGAACATAGTTGAGGAGTTATTACCTTTAGATGGTACTCAAACTGAAGGTGCAATGAAGGTAGGAGGGAGTCAGGGCCCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTGAAGAATCTGGTTTAACTTCTAGAGCTTGTTTGTGTGTCCATGTCAATGAAATTATTAGAATTAAAAATGAGCATCCTGATGATCCCCATTGTATAGTCAATGATAGAGTTAAAGGGCGTCTTAAGGTCACCAGAGCTTTTGGGGCAGGATTTTTGAAACAGCCGAAGTTGAATGCTGCAGTACTGGAAATGTTTCGTAATGAATATATTGGAACTGCCCCATATGTATCTTGCTTCCCTTCAGTACGTCACCATAGATTATGCCCAAGGGATCAGTTCTTGATCCTCTCATCTGATGGTTTGTATCAATACCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCCGCCCAACATTTAATAGAAGAGCTGCTCCTCCGTGCAGCCAAAAAAGCTGGATTAGATTTTCATGAATTGCTGGATATTCCGCAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATATGGAAATCATCAGGCAAATATCTATGA 2343 0.4652 MGSGVSSLCSCFEPVHRTKKNHNQNVIFTQEEPLDETLGHSFCYVRSSARFLSPTRSDRFLSPSTSLRFSPTHESLPKTRPDFPETTFKAISGASVSANSSVPKTVIQLEEESSTSAAAVFDSSVKGTIVNGFESTSSFCALPLQPVPRGAELFEGSGFFLSGPFESGAHSGPINAGAGVDSAVSGGRDVPFSAPLGGMYGRKKGVSGFRKAFQRKVSDKKRPWVVPVLNFVGRKEVPASEGREKPVEVKSESNVQWMLGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNMYRAVYNELQGLFWEVEETMESNPVEVKNKTEGENSGAGLVNVVREAETGTVSKRRRLWELLAEDPEDGLDLSGSDRFAFSVDDALSVSNANAGSAISRRWLLLSKLKNGLSKHREGNGRKLLPWSLGNEEEKEEKSEVENKPSASSTGSGGGRRRKLGPVDHDLVLNAMSRALQVTELAYLDMTDKHLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEGQDTSNVEPASKEQDVGVGSSSGNIVEELLPLDGTQTEGAMKVGGSQGPAQEMRLAALQLSTDHSTSIEESGLTSRACLCVHVNEIIRIKNEHPDDPHCIVNDRVKGRLKVTRAFGAGFLKQPKLNAAVLEMFRNEYIGTAPYVSCFPSVRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGLDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03557 780 MobiDBLite consensus disorder prediction 533 550 - -
Trre15g03557 780 Pfam Protein phosphatase 2C 612 732 IPR001932 -
Trre15g03557 780 MobiDBLite consensus disorder prediction 410 439 - -
Trre15g03557 780 ProSiteProfiles PPM-type phosphatase domain profile. 248 768 IPR001932 -
Trre15g03557 780 SMART PP2C_4 248 766 IPR001932 -
Trre15g03557 780 CDD PP2Cc 460 768 IPR001932 -
Trre15g03557 780 MobiDBLite consensus disorder prediction 410 457 - -
Trre15g03557 780 Gene3D - 235 775 IPR036457 -
Trre15g03557 780 MobiDBLite consensus disorder prediction 528 550 - -
Trre15g03557 780 SUPERFAMILY PP2C-like 260 769 IPR036457 -
Trre15g03557 780 PANTHER PROTEIN PHOSPHATASE 2C 248 767 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03557 Trre-Chr15 42633664 42638143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03557 1 780 PP2C-type Phosphatase Gene Family AT2G35350 54.192 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03557 - - mtr:11415473 1228.39