Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03481 ATGCTGGCCTTTAGATTTACAGCAGCTGTGTGTTGCTGCCTTGGCTGTTCTTCCTACATTTTAGTGGTTCTGTGCTTGCTATGGATCGGTGTAGAAGATGTTGGCTTTCAACGCTCAGGGACAACACTCAATCTTGCAACTCTTCCTATAGCTATTGGTCTTTACGGTTACTGTTATTCTGGACATGCCGTGTTCCCAAATATTTATACTTCCATGGCAAATCCAAACCAATTCCCTGCAGTACTAGTAGCATGTTTTGGAGTTTGTACCTTACTGTATGCTGGCGGTGCTTTTATGGGATACAAAATGTTTGGAGACGATACTCTCTCGCAATTCACTCTTAACCTGCCGCAAGACTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATGCATACATAGAGATGGAAAAAACTTATTCATCTTAA 459 0.4161 MLAFRFTAAVCCCLGCSSYILVVLCLLWIGVEDVGFQRSGTTLNLATLPIAIGLYGYCYSGHAVFPNIYTSMANPNQFPAVLVACFGVCTLLYAGGAFMGYKMFGDDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYPLYAYIEMEKTYSS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03481 152 Pfam Transmembrane amino acid transporter protein 6 143 IPR013057 -
Trre15g03481 152 PANTHER OS05G0424000 PROTEIN-RELATED 20 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03481 Trre-Chr15 41536733 41538937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03481 15 140 Amino Acid or Auxin Permease AAAP Family AT2G39130 76.378 1.29e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03481 K15015 - gmx:100775840 221.09