Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03479 ATGGCTTCCAATATTTCTCTCTACATGTGGTTCTACTGTATCACAAACCTTCACTTCATTCTCACATTGGCTCAGTCTAATAACTATATCATTCACATGGATTTATTAGCTATGCCAAAGGTATTCTTAAACCAACATCGTTGGTATGAGTCCACTCTTTCTCAAATTACTACCAACAATATTCCCAGGTCTACCTCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCTAGTCTATCATCTGAAGAGCACGAAGCTCTCAAAATCTCCCCTGGTTACATTTCATCAATACCAGATTTACCCCTGAAGTTTGACACAACACGTTCACCTCAATTCATTGGTCTTAATTCCTACAAAGGGGCATGGCCAGCTTCTGATTTTGGCAAAGATGTAATTGTTGGTGTGATTGACTCTGGTATTTGGCCAGAAAGTGAAAGTTTCAATGATGAGGGAATGACAAAAATACCTTTAAAATGGAAAGGCCGGTTATGCCAATTTGAAAATACTAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCCAGGTATTTTAATAAAGGGTTCTTGGCGAACTATCCAAACATTAGTAGAACCATTGTGAACACCACACGTGACATATTCGGTCATGGGACCCACACTTCATCAACAGCAGCCGGAAGTAGAGTAGAAGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCAACAGGGATAGCTTCATTGTCAAGAGTAGCCATGTACAAGGTCGGGTGGGGACAACATGGAGGAGATATTGTTTCATCTGATATATTAGCTGCAATTGATGCAACAATATCAGATGGTGTTGATGTTATTTCAATATCACTAGGCTATAACAATGTGCCTTTGTATGAAGATGTTATTGCTATAGCAACATTTGCAGCAATGAAAAAAGGTATTTTTGTATCTACTTCAGCTGGTAATGATGGACCTTCCTTTAAAACTCTACACAATGGAACACCATGGGTGATCACGGTTGCTGCTAATACTTTAGATCGCGAGTTTCATGGAAATCTTACACTTGGTAATGGAGTCTCACTCACAGGTATCTCTTCTTATATTGGTAAATTCTCCGGTAGCAACTTTTCGATTGTTTACATGGGTATGTGTGACAATGTTAAAGATCTAGTCAAAGTGAACAGCAAGATTGTGGTTTGTGAAGATACGAATGGAACTTTTGATTATCTTGGTAAACAAATTGAAAATGTGGTCGAAGCAAAAGTTGTTGGAAGTGTTTTCATATCAAACATATCACAAAATGTATATACCCAAATGTTATATACGGTCCCATGCATCATTATTAACCCCAAAAATGGAGAAATAGTCAAAGATTTCATCAAGAGGACCTCTAACTCTAGTTCAATGGCAAAAATGTCTTTCAAGATAACATATGTTGATGCTAAGCCAGCACCTAGTGTGTATTCTCATAGTTCAAGGGGGCCTTCAAAAAATTGTCCATATGTTTTAAAACCTGACATTACAGGTCCTGGTGTATCAATCTTAGCAGCATGGCCCACAAATAGTCCTCCGTTTGATTTTGGAACTTATAAAATCTCAACCAAGTTCGTTTTATTGAGTGGAACATCTATGTCTTGTCCTCTTGTTGCTGGTGTTGCGGCGCTTTTAAAAGGCGCACACAGTGATTGGAGCCCTGCAGCTATTCGATCGGCAATAATGACAACATCAGATATCTTTGATAATACTAAGGAACACATCAAAGACACTGCAACAGGTAACAAAGCAACACCTTTTGCATTGGGGGCTGGTCATGTTAATCCAAATAGAGCACTTGACCCTGGTTTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTGACACAAAAAAACATCATTTCCATTACAAGATCATCTTTCAATGATTGTTCTAAACCTTCATTGGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACACAACATTTTCACAGAACAGTTACCAATGTTGGTGAAGGACAAACAACTTATGTTGCTAGCATTACTCCAATTAAACGTTTCCGTATCAGCGTTATCCCAAATAAGTTGGTGTTCAAGAAAAAGAACCAAAAGCTAAGTTACAGGTTGAGCATTGAAGGTCCAAGAATGATACTAAAGAATAAAGTATCTTTTGGATATCTCACTTGGAAGGATGGGAAGCATATAGTGAGGAGTCCTATTGTTGTAACCACCCTCAATTTTAATTTGTAG 2286 0.3745 MASNISLYMWFYCITNLHFILTLAQSNNYIIHMDLLAMPKVFLNQHRWYESTLSQITTNNIPRSTSSKIIYTYNNVMNGFSASLSSEEHEALKISPGYISSIPDLPLKFDTTRSPQFIGLNSYKGAWPASDFGKDVIVGVIDSGIWPESESFNDEGMTKIPLKWKGRLCQFENTNNSSLCNKKLIGARYFNKGFLANYPNISRTIVNTTRDIFGHGTHTSSTAAGSRVEGASFFGYANGTATGIASLSRVAMYKVGWGQHGGDIVSSDILAAIDATISDGVDVISISLGYNNVPLYEDVIAIATFAAMKKGIFVSTSAGNDGPSFKTLHNGTPWVITVAANTLDREFHGNLTLGNGVSLTGISSYIGKFSGSNFSIVYMGMCDNVKDLVKVNSKIVVCEDTNGTFDYLGKQIENVVEAKVVGSVFISNISQNVYTQMLYTVPCIIINPKNGEIVKDFIKRTSNSSSMAKMSFKITYVDAKPAPSVYSHSSRGPSKNCPYVLKPDITGPGVSILAAWPTNSPPFDFGTYKISTKFVLLSGTSMSCPLVAGVAALLKGAHSDWSPAAIRSAIMTTSDIFDNTKEHIKDTATGNKATPFALGAGHVNPNRALDPGFVYDVGVQDYVNLLCALNLTQKNIISITRSSFNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRISVIPNKLVFKKKNQKLSYRLSIEGPRMILKNKVSFGYLTWKDGKHIVRSPIVVTTLNFNL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03479 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Trre15g03479 761 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Trre15g03479 761 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Trre15g03479 761 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Trre15g03479 761 FunFam Subtilisin-like protease SBT1.9 18 110 - -
Trre15g03479 761 Pfam Subtilase family 133 601 IPR000209 GO:0006508|GO:0008236
Trre15g03479 761 SUPERFAMILY Subtilisin-like 109 612 IPR036852 GO:0004252|GO:0006508
Trre15g03479 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 109 IPR037045 -
Trre15g03479 761 Pfam Fibronectin type-III domain 653 754 IPR041469 -
Trre15g03479 761 CDD Peptidases_S8_3 107 575 IPR034197 -
Trre15g03479 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 754 IPR045051 -
Trre15g03479 761 Gene3D - 344 477 - -
Trre15g03479 761 Gene3D Peptidase S8/S53 domain 135 622 IPR036852 GO:0004252|GO:0006508
Trre15g03479 761 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Trre15g03479 761 FunFam Subtilisin-like protease SBT1.5 135 353 - -
Trre15g03479 761 CDD PA_subtilisin_like 350 463 - -
Trre15g03479 761 ProSiteProfiles Serine proteases, subtilase domain profile. 117 609 - -
Trre15g03479 761 Gene3D - 626 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03479 Trre-Chr15 41510912 41513197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03479 21 757 Subtilisin-like Serine Gene Family AT5G67090 42.725 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03479 - - gmx:100786751 929.472