Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03477 ATGCCAGCGTGTTATGTTGAAGTTCCAGGAGCTTATTCACAGAGATATGAACAAGGAAAGACGTTGAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTGCTCGAACATGCTTGTGGGATGGCAACACTACAGATGAGAGAGTATGTTTCTAATGTATCACATGGAATTGATACTTTCAGCATCAGAGAACCACTCGGTGTTTGTGCCGGTATCTATCCTTTTAACTTTCCCGCAATGATTCCCCTGTGGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTAA 291 0.4467 MPACYVEVPGAYSQRYEQGKTLKDAQGDVFRGLEVLEHACGMATLQMREYVSNVSHGIDTFSIREPLGVCAGIYPFNFPAMIPLWVLVLLDKGAWL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03477 96 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 15 87 IPR010061 GO:0004491
Trre15g03477 96 SUPERFAMILY ALDH-like 15 88 IPR016161 GO:0016491
Trre15g03477 96 Pfam Aldehyde dehydrogenase family 14 87 IPR015590 GO:0016491
Trre15g03477 96 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 90 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03477 Trre-Chr15 41490884 41491647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03477 17 87 Aldehyde Dehydrogenase Gene Family AT2G14170 81.690 2.68e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03477 K00140 - gmx:100791508 139.043