Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03469 ATGCTCAAAATTGGTGAAGGAGGTTTTGGAAGTGTTTATAAAGGATCAATTTTACCACCAAATGGACAAGGTGATCCAATTATAGTTGCTATCAAAAGGCTTAACACTCGTGGATTTCAAGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGATATTGCTCTGTAGACGGAGAAAGAGGAATCCAACGGCTATTGGTGTATGAGTTCATGCCAAACAGGAGCTTGGAAACTCACCTTTTCAGTAAAACTTTACCAACCCTTCCATGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTGAAGGATTAGCTTATCTGCACGAGGGATTGGAGATACAGGTGATCTACCGAGATTTCAAATCTTCGAATGTCCTATTGGATGAGGATTTTCATCCGAAGCTCTCAGATTTTGGTCTTGCAAGGGAAGGGCCACAAGGGGATCAGACTCATGTATCTACTGCGGTAGTTGGGACACAAGGATATGCCGCGCCAGAGTATATTGAAACAGGTCATCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGGGTTGTACTCTACGAAATCCTCACTGGAAGACGATCATTAGAAAGGAACCGTCCAACAGCTGAACAGAAGCTATTAGATTGGGTTAAACAATATCCTGCTGACAGTAACAGATTCAGCATAATTATGGACCAGCGTCTTAGGAACCAATATCCGATCGCTGCAGCTCGCAAAATAGCAAAGTTAGCCGATAGTTGCTTGAAGAAGAATGCAGAAGATAGACCATCTATGAATCAGATAGTGGAAGGGTTGAAACAAGCATTGCAATATTCGGAAATGTCAAGCACTCCTCACGATAATGCTGAATCGTCTCGGTCTAAATTGGTTCAAAGAAGTAAATAG 927 0.4175 MLKIGEGGFGSVYKGSILPPNGQGDPIIVAIKRLNTRGFQGHKEWLAEVQFLSIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLETHLFSKTLPTLPWKTRLEIMLGAAEGLAYLHEGLEIQVIYRDFKSSNVLLDEDFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADSNRFSIIMDQRLRNQYPIAAARKIAKLADSCLKKNAEDRPSMNQIVEGLKQALQYSEMSSTPHDNAESSRSKLVQRSK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03469 308 ProSitePatterns Protein kinases ATP-binding region signature. 4 32 IPR017441 GO:0005524
Trre15g03469 308 SUPERFAMILY Protein kinase-like (PK-like) 3 278 IPR011009 -
Trre15g03469 308 Gene3D Transferase(Phosphotransferase) domain 1 85 305 - -
Trre15g03469 308 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 84 293 - -
Trre15g03469 308 MobiDBLite consensus disorder prediction 286 308 - -
Trre15g03469 308 CDD STKc_IRAK 4 281 - -
Trre15g03469 308 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03469 308 PIRSF ILK 10 297 - -
Trre15g03469 308 PANTHER OS01G0588500 PROTEIN-RELATED 4 283 - -
Trre15g03469 308 Gene3D Phosphorylase Kinase; domain 1 4 84 - -
Trre15g03469 308 Pfam Protein tyrosine and serine/threonine kinase 3 278 IPR001245 GO:0004672|GO:0006468
Trre15g03469 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03469 Trre-Chr15 41296334 41299237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03469 4 279 Glycoside Hydrolase AT3G07070 48.201 1.22e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre15g03469 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03469 - - adu:107483795 541.576