Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03423 ATGGATATGACAGTTATTCAGTCTGTGAAGAAGATGCAGAGTGAGGAAGAAAAATTGATAGCGCGAATATTAAAGATTACTGATAAGAAAAAAGGTTTCATAGAGTTACTGCAACAACTAAGCAGTTGTGATTCAGTTTCTGAAAAGGAATTTGATGATCGATTTAAAGAGCTTGATTCAGTTGGAGATGATCATGTTATTTGTGTTATTGAGGATGAGATTTATGGAAAGATTATTGCAATGGGGAGTGTGTTTATTGAGAAGAAATTTTTGAGAAATTGTGGTAAAGTTGGACATATTGAAGACGTTGTTGTTGATTCAAGTGGTCGTGTGAAGCAATTAGGGAAGAAAGTGATCAATTTTCTAACTGATCATGCTCGTTCTATTGGATGCTATAAGGTTATTCTTGATTGTAGTGTTGAGAATAGGGCTTTCTATGAGAAATGTGGTTTTAAGCTGAAAGAAGTTCAGATGGCTATGTATTTTGTTTGA 492 0.3394 MDMTVIQSVKKMQSEEEKLIARILKITDKKKGFIELLQQLSSCDSVSEKEFDDRFKELDSVGDDHVICVIEDEIYGKIIAMGSVFIEKKFLRNCGKVGHIEDVVVDSSGRVKQLGKKVINFLTDHARSIGCYKVILDCSVENRAFYEKCGFKLKEVQMAMYFV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03423 163 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 13 158 IPR039143 GO:0004343|GO:0006048
Trre15g03423 163 CDD NAT_SF 69 137 - -
Trre15g03423 163 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 32 161 IPR016181 -
Trre15g03423 163 FunFam Glucosamine 6-phosphate N-acetyltransferase 3 159 - -
Trre15g03423 163 Pfam Acetyltransferase (GNAT) family 46 151 IPR000182 GO:0016747
Trre15g03423 163 Gene3D - 16 163 - -
Trre15g03423 163 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 21 163 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03423 Trre-Chr15 40363071 40363562 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre15g03423 Acetyltransf_1 1.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03423 K00621 - jre:108979803 238.424