Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03321 ATGGAGAGGGAAGACTCTGTCCTTATAGAAACTCATGAACTTTGTCTTCAACCAACCACTTTCTTATCTTCATCCATTATTGTTTCCACCTCTAATTCCTCTTCAGAAGAAGAAGAAGCTACTAACAAAAAATTATGCAATATTGGTAGCAAAAAAGAAAAGAAAAAGAAGAAAGTGGCAATGGTGAATAGAGTGATTCATAAAAATGATGATATGAAGCATCCAACATATAGAGGAGTAAGAATGCGTCAATGGGGCAAATGGGTATCTGAAATTAGAGAGCCAAGAAAAAAATCAAGAATTTGGCTTGGAACTTTTCCAACTCCTGATATGGCGGCTCGAGCTCATGATGTCGCAGCTCTTACTATCAAAGGCTCTTCAGCTTACCTCAATTTTCCCGAATTAGCTACGATGTTGCCACGGCCAGCTAGTTCCTCTCCTAAGGATATTCAAGTTGCGGCCGCAAAAGCAGCCGCTACTATTTACAATCAACCAATCAATCAAATTGAATTGGAAGTTGAAGTCGACCCGAGCCAAGTTGTTTCTTCTTCTTCTTCATCTTCTTCTCCGAGCCATAGTGAAGGGTCGTCGTTGATTGGTGAGGATGACATGTTTGTGAACCTTCCCGATCTCACACTCGATTTAAGACATAGGAATGATGGTGAGTTTTATTACTCCCCATCGGCTTGGCTTGTAACGGGAGCTCAATATATAGACTCGGGTTTTCGGCTCGAAGAACCTTTTCTATGGGACTAA 756 0.4101 MEREDSVLIETHELCLQPTTFLSSSIIVSTSNSSSEEEEATNKKLCNIGSKKEKKKKKVAMVNRVIHKNDDMKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELATMLPRPASSSPKDIQVAAAKAAATIYNQPINQIELEVEVDPSQVVSSSSSSSSPSHSEGSSLIGEDDMFVNLPDLTLDLRHRNDGEFYYSPSAWLVTGAQYIDSGFRLEEPFLWD 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03321 251 Gene3D AP2/ERF domain 76 134 IPR036955 GO:0003700|GO:0006355
Trre15g03321 251 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Trre15g03321 251 MobiDBLite consensus disorder prediction 180 200 - -
Trre15g03321 251 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Trre15g03321 251 MobiDBLite consensus disorder prediction 180 196 - -
Trre15g03321 251 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Trre15g03321 251 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Trre15g03321 251 SUPERFAMILY DNA-binding domain 76 134 IPR016177 GO:0003677
Trre15g03321 251 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Trre15g03321 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 43 212 - -
Trre15g03321 251 FunFam Ethylene-responsive transcription factor 2 75 134 - -
Trre15g03321 251 CDD AP2 77 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03321 Trre-Chr15 33022851 33023606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03321 69 249 AP2-EREBP Transcription Factor Family AT2G44940 51.442 5.68e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre15g03321 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03321 - - mtr:11413436 310.842