Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03301 ATGAGGAATTCAGGGATTATGAATGATGTGGTTATAATTGGAGGGTTAATTTCTACACAATTTGTTTATGCTGGAAATGCTATGCTCATGAGTTATCTTATGTCTTTGGGTCTCCAATGTTTTACAATTGTTATTTACACTTCCTTTGCAACATTTCTAATTCTCCTACCCTTTGTTCTTTATTTTGAAAGGAGTAAATGGCCCAAGAGAATCAGTTTCAAGTTGATTGTACAATTTCTCCTTCTTGCTCTTGGAGGTGTAACTTTGTTCCAATCTTTATTCCTTAAAGGAATCAATCTAACCTCACCAGCAATGGGAACAGCCATGCCAAACCTTGCACCGGGAATTATCTTCATCATCGCGTGGACTTTTCGGTTGGAAAAAGTGGACTTAAGGTGCACATATAGTAGAGTAAAAATAACTGGCACATTGCTTTGTGTCTTAGGGGCATTCACAATGAGCTTAATGCAAAGTATCTCAATTTCTTTACCAATTGAAGGGTTAAAATTTCAATTAACAACTCCACCACCACCGGTTGTAATGTTTGATAGAGACAAGATAATTGGTTGTCTCTATCTCTTGGCTTCAATTCTTGTTCTCTCCGTCGCCGTTGTTCTACAGGCTTTTACTCTAGGAGAATTTCCTGCACCAATGTCTTTGAGTGCAATAACATCATTTTTTGGAGGGTTGATCACTACAGCAGCTCAATTAATTGAATATCATGAATTTAAAACTGGGTGGCCACTAGTGAGTGCTGGTGACATGATTGGCTATTCTGTTCTGTCAGGTGCAGTGAATGGAATAGGATTAAGCTTCAGTGCTTGGGCACTTGAGAAGAGAGGGCCAGTTTTGGTATCCATGTTTAGTCCTGTTGGCACAGTTTGCTCTGTCATTTTCTCTATTGTCACTCTAGGAGACAGTACAGTTAATATTGGAAGCATAGCGGGTATGTTCTTGATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGATGGTTTAGAGAGTGAATTAGATGCAGAGAAGCCTCTCTTAAGTTGA 1050 0.3933 MRNSGIMNDVVIIGGLISTQFVYAGNAMLMSYLMSLGLQCFTIVIYTSFATFLILLPFVLYFERSKWPKRISFKLIVQFLLLALGGVTLFQSLFLKGINLTSPAMGTAMPNLAPGIIFIIAWTFRLEKVDLRCTYSRVKITGTLLCVLGAFTMSLMQSISISLPIEGLKFQLTTPPPPVVMFDRDKIIGCLYLLASILVLSVAVVLQAFTLGEFPAPMSLSAITSFFGGLITTAAQLIEYHEFKTGWPLVSAGDMIGYSVLSGAVNGIGLSFSAWALEKRGPVLVSMFSPVGTVCSVIFSIVTLGDSTVNIGSIAGMFLMFTGLYFVLWAKGKEDGLESELDAEKPLLS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03301 349 PANTHER WAT1-RELATED PROTEIN 15 335 IPR030184 GO:0016020|GO:0022857
Trre15g03301 349 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020
Trre15g03301 349 Pfam EamA-like transporter family 188 328 IPR000620 GO:0016020
Trre15g03301 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03301 Trre-Chr15 32468158 32471364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03301 3 340 Nodulin-like Gene Family AT5G47470 58.112 4.50e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03301 - - mtr:11409967 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00526 9 3782254 3784170 Trre15g03301 15 32468158 32471364 PCT