Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03278 ATGCTACGTCGACTCCTATTGTCAACAAAAACCAACCTTTTCCAAAACCCTAACCACCCTTTATCTTCTTCTAAACTAACCTTCATTCGAACCATGAGTTCAACCTCCTCAGAGCGCATGTTTCAGCTCAAGCTTGACCCTTTAACCGGTAACTCCGAATGGGTCATCATCGAAGAAAACAACAACGACGAAGAACAAAGCTTCAACCAACCCCTTCTCGCCACAACATCGTATTTAGACATGCTCAATGATTCAACCAGAAACACAGCATTTCGTCAAGCCATTGAAAAAACAGTAACCAAACCTTGTCACGTTCTCGATATCGGTGCTGGAACTGGGTTGCTATCGATGATGGCTTCACGAGCTATGAATGGGAAAGGAACGGTAACTGCTTGTGAATCTTATCTTCCAATGGTGAAGTTGATGAAGAAAGTTATGCGACTTAATGGGATGGAGGGAAGAATCAAAGTTTTCAATAAGCGCTCTGATGAACTTGAAGTTGGGATTGATATATCTTCGCGTGCTGATGTTCTTGTGAGCGAGATATTAGATTCAGAGTTATTGGGTGAGGGGCTTATACCAACCCTACAACATGCGCATGACAATTTGTTGGTGGAAAACCCTCTAACTGTACCATATCGAGCAACTACATATGGACAGCTAGTTGAAAGCACTTTCTTATGGCGCTTGCATGATTTGCGTAGCAATGAGGCTGGTGCATCTGATGGCATTCGACTTGCCCCTCCTGGACTTGAAAATGTTATAGGTGTAAAACGTCAGCAATATGCCATGCATTGCGATCCAATAGGAGAAGAACTGAAACCGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTACGGCGAAACTGACCTATGCATAAAGGCAACTGATGATGGCAGAGTTCATGCTGTTGTCTCTTGGTGGGTACTTCAACTTGATCGCGAGGGGACAATTTATTATTCCACGGCTCCTAGGTGGATAAGATCATCAACAACTACAAGTGAGGATTTTGAATGGTGCGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGGAGTGGTATATCCATATTCAAAGGGGGAGAAATTAATTTACATGCTACTCATGATGATATTAGTATCTCATATAATTTAAATACTCAAGTGTCAACAACTGAGATTTTGCCTGATGGGTTAACGACCGGAGATTTCCAGCTTTTAATTCCTCCAGAAAGGGCTGCAATCTATGGAGACAAAGGATGGAGGCTTTCAATGTTGAAAGCAATAAAAAGTGTGGGAAGAGGTCACTTGTTATGCTTGGTTGCAGATGATAGTGTGTATTTGCCTCTTCTTGTTGCAAAGCTTTCAGAAGCACCAAATGTAATATCATCTTTTTCGAGGCTGAAGGAAAAGAGCCGCCAATATTTGCAAGCTGCTGTCCGTGCAAATAACCTGCCACCTAATTGCATAAAAACTGTTGAAAAAGGGGTGAAGCAGTTAACCATGCATGATACAAACCAGAAAAAGGTTGACCTGTTAATAGCAGAACCTTTCTATTTTGGACATGATGGCATGCTTCCATGGCAGAATCTGCGGTTTTGGAAGGATCGTACAACACTTGATTATATCCTCTCCGAAGATGCTATAATAATTCCCAGTAAAGGAATTTTGAGGGCTTGTGCCATCTATCTTCCTGATCTTTGGAAAAGTCGTTCCTGCTTGAGTACGATAGAAGGTTTTGACCATTCTGGTGTAAACACTACATTGGGAGCTTGCGGTCATCTACCCAAATTGGAAGAGGGTCCATGTCTGCCTTTTTCTCTTTGGCAGTGTGGAGAACTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCACAAAACAAATATGCCAATGTGAAGGAAAATCCCAGGTTCAATTCATGAAGACTGGAGTATGTCATGGGTTTGCGCTGTGGATTGACTATGTGATGGATTCACAAAATTCTGTTGTGATATCAACTGGTCCAGATAAGAGATATTGGAAACAAGGAATAAAGCTTCTTGCAACACCTAGAACTGTAGGACCCCAAGGATCATTAAATGTCCAAGCATGTTCTGCAGATATTGAAGCATCTTTTAATCCATCAAATGGGGAACTCAAAATTATACTTGATTTCTTATGA 2175 0.4143 MLRRLLLSTKTNLFQNPNHPLSSSKLTFIRTMSSTSSERMFQLKLDPLTGNSEWVIIEENNNDEEQSFNQPLLATTSYLDMLNDSTRNTAFRQAIEKTVTKPCHVLDIGAGTGLLSMMASRAMNGKGTVTACESYLPMVKLMKKVMRLNGMEGRIKVFNKRSDELEVGIDISSRADVLVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLWRLHDLRSNEAGASDGIRLAPPGLENVIGVKRQQYAMHCDPIGEELKPLSEPFKIFEFDFWKRPESYGETDLCIKATDDGRVHAVVSWWVLQLDREGTIYYSTAPRWIRSSTTTSEDFEWCDHWKQCVWFVPGSGISIFKGGEINLHATHDDISISYNLNTQVSTTEILPDGLTTGDFQLLIPPERAAIYGDKGWRLSMLKAIKSVGRGHLLCLVADDSVYLPLLVAKLSEAPNVISSFSRLKEKSRQYLQAAVRANNLPPNCIKTVEKGVKQLTMHDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFWKDRTTLDYILSEDAIIIPSKGILRACAIYLPDLWKSRSCLSTIEGFDHSGVNTTLGACGHLPKLEEGPCLPFSLWQCGELDVLSETFDVMEFDFTKQICQCEGKSQVQFMKTGVCHGFALWIDYVMDSQNSVVISTGPDKRYWKQGIKLLATPRTVGPQGSLNVQACSADIEASFNPSNGELKIILDFL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03278 724 Gene3D - 214 397 - -
Trre15g03278 724 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 376 IPR029063 -
Trre15g03278 724 FunFam Protein arginine N-methyltransferase 71 213 - -
Trre15g03278 724 Gene3D - 557 723 - -
Trre15g03278 724 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 393 724 IPR025799 GO:0016274|GO:0018216
Trre15g03278 724 FunFam Protein arginine N-methyltransferase 7 405 553 - -
Trre15g03278 724 FunFam Protein arginine N-methyltransferase 1.6 214 398 - -
Trre15g03278 724 FunFam Protein arginine N-methyltransferase 1.6 557 723 - -
Trre15g03278 724 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 58 383 IPR025799 GO:0016274|GO:0018216
Trre15g03278 724 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 475 700 IPR025799 GO:0016274|GO:0018216
Trre15g03278 724 PIRSF Arg_N-mtase 38 720 IPR014644 GO:0006479|GO:0008168
Trre15g03278 724 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 473 700 IPR029063 -
Trre15g03278 724 Gene3D Vaccinia Virus protein VP39 71 213 IPR029063 -
Trre15g03278 724 Gene3D Vaccinia Virus protein VP39 406 553 IPR029063 -
Trre15g03278 724 Pfam Ribosomal protein L11 methyltransferase (PrmA) 93 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03278 Trre-Chr15 31686459 31691370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03278 78 218 C2H2 Transcription Factor Family AT3G12270 32.000 2.06e-11 65.5