Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03276 ATGGCTTCTCCTCTGCTTTTGCTCCTCCTCATCACACTCTCCATTTCACATCCTTCATCACAAATGATACTATTACCTCTAACACACTCACTCTCCAAAACACATTTCAACACAACCCATCACCTCCTCAAATCCACCACCACTCGTTCCACATCACGCTTCCACCACCACTATAAAAACCACCACCAACTCTCCCTCCCACTCTCACCAGGAACTGATTACACTCTCTCCTTCAACTTCGGCCCACACTCCCAACCCATAACTCTCTACATGGACACTGGAAGCGACCTTGTCTGGTTCTCCTGCACCCCATTCAACTGCATACTTTGTGAACTCAAACCAAACCCTCCATCATCATCTTCTTCTCCACCCACCAACATCTCCCACAGCACCCAATTTCATGCAACTCCAAACACTACTAGAAAACTCGCTTTTAGCAACCGATTTAGAGACCGAAAAATTTCGGTCACCATAGAGACCGATTTAGAGACCGATATTTTGAACGTAAACTTTTAA 516 0.4554 MASPLLLLLLITLSISHPSSQMILLPLTHSLSKTHFNTTHHLLKSTTTRSTSRFHHHYKNHHQLSLPLSPGTDYTLSFNFGPHSQPITLYMDTGSDLVWFSCTPFNCILCELKPNPPSSSSSPPTNISHSTQFHATPNTTRKLAFSNRFRDRKISVTIETDLETDILNVNF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03276 171 Gene3D Acid Proteases 27 167 IPR021109 -
Trre15g03276 171 Pfam Xylanase inhibitor N-terminal 74 134 IPR032861 -
Trre15g03276 171 SUPERFAMILY Acid proteases 22 133 IPR021109 -
Trre15g03276 171 ProSiteProfiles Peptidase family A1 domain profile. 74 171 IPR033121 -
Trre15g03276 171 PANTHER ASPARTYL PROTEASES 5 128 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03276 Trre-Chr15 31682890 31683405 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03276 - - gmx:100805699 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03276 15 31682890 31683405 Trre15g03276 15 31682890 31683405 ECH
Trre15g03276 15 31682890 31683405 Trre5g04741 5 49285752 49288225 ECH
Trre9g00507 9 3666885 3668324 Trre15g03276 15 31682890 31683405 PCT