Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03211 ATGGCTAGTGGATGGATGAAGTCTTTACAATGCAAATCAAGAGCATTTGAAGATGTTTATAATCCATATCCCAAAATCCTCTTACCCAGTGCCAGTTGCAGAAAAACCGTTCAAAACATCAAAGACATTGTCGATATTCCAAAACCCAAACCCAAAAAACCAAAAACATCCTTAGGAAATAAACATTCTACTTCAAAATCTAAATGCACAACAACCACAAAATCAGAATCACAATCACCCAACATGAACCGTTCACGAACCACCACAACAACAACCACTTTATCATCATCTTCACGTGCAATCACTGAACTAACAGAAGGACACCCATCACGAAACGTGGTGGATATAATTTTTCATACTAGTTGGGGCACTAAGGAGTTTCCGGGTCGGGTTGAAATGGTGTTTAAGGTGCAAAACGGAGCACGAACCATGTCGCGGTTTGAAGAGTTTCGTGAGGCGGTGAAAGAACGCGCCGCTGATTCTGTGGTTGATTCTGATGGGAAAAATTGGGAGGAGAATGCAAGGTGTGTTGCTGATGGAAATGAGGTGATGCAGTTTCATTGTTTGGGTCCTGCTGAAGACGGTGGTTCACACGGTGCTTGGTTGTTTCCGGAGCGTAAAGGGTCGGCGATTTGTACGTTTTCAGGGAGCGGCGGCGCGCATGAGTATGGCGGCGGAGGGAAGGGTAGACAGGCAATGTTGGTTTGTCGGGTTGTGGCTGGTCGGGTTTCGAAACAACTCGGGTTTTTGGATTCTTTGTTGGATAAGCGAGTTGGTTTCGACTCAGTGAGTGGGGACAATGGCGAGTTGTTGGTTTTTGATTGGCGGGCGGTGTTGCCATGTTTTCTTATTATTTACAGCTTGTAA 867 0.4521 MASGWMKSLQCKSRAFEDVYNPYPKILLPSASCRKTVQNIKDIVDIPKPKPKKPKTSLGNKHSTSKSKCTTTTKSESQSPNMNRSRTTTTTTTLSSSSRAITELTEGHPSRNVVDIIFHTSWGTKEFPGRVEMVFKVQNGARTMSRFEEFREAVKERAADSVVDSDGKNWEENARCVADGNEVMQFHCLGPAEDGGSHGAWLFPERKGSAICTFSGSGGAHEYGGGGKGRQAMLVCRVVAGRVSKQLGFLDSLLDKRVGFDSVSGDNGELLVFDWRAVLPCFLIIYSL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03211 288 Gene3D - 99 287 - -
Trre15g03211 288 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 286 - -
Trre15g03211 288 SUPERFAMILY ADP-ribosylation 101 287 - -
Trre15g03211 288 MobiDBLite consensus disorder prediction 44 101 - -
Trre15g03211 288 MobiDBLite consensus disorder prediction 60 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03211 Trre-Chr15 30418459 30419325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03211 100 288 C2H2 Transcription Factor Family AT2G29660 35.526 2.49e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03211 - - mtr:25493617 416.001