Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03202 ATGAGGAATGCAGAATGTCAGCTGGCTATGAATGTTCTTTGGACAAGATTGAGTGAAACTGGAAAGGATTGGCGATATGTATACAAGTTTGTCGTAGATCGAGTTTTTTTTCCCGCTGAATTGAATGAGGTTTTGACAAGAGAGCTTGCTGAGGATGGTTATTCTTGGCAAAAAAGGCAGAGAGCTGAATATCTCAGGCACAGGGGAAGAGTGTGGTTATGCGTGGGAGAATTGGATTACAATGTCAAAGCAGGCAGTTTTCTAGAGCTGAACTGCATTTTAGTTCGTGTTCTGTGTACATGGTCAATTGATTCATTCATGAAGCCTGGTGAGATCAATTCAGTGGAAGTGGTTAGGGAGGAAAGATTCATGCAACTGTGTTGA 384 0.4193 MRNAECQLAMNVLWTRLSETGKDWRYVYKFVVDRVFFPAELNEVLTRELAEDGYSWQKRQRAEYLRHRGRVWLCVGELDYNVKAGSFLELNCILVRVLCTWSIDSFMKPGEINSVEVVREERFMQLC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03202 127 Gene3D - 23 65 IPR015946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03202 Trre-Chr15 30159995 30162897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03202 29 55 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 85.185 1.93e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03202 K12471 - csav:115697285 61.2326