Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03147 ATGGAAGAACCCTTTCTAAAATCAATTTTGAGCTTTTCTTCCGCTCCAAATCGCATAGCCAGGTTCAATTTCAGATTTCTATTTCGAGATGGAGTTTTGCTTTTCCCTTCCCAAATCAAGCAGGGTTCGTCGCCTTCTCGAATCGTCAAACTAGGTGACTTTGGTCTTATTAAAATGTTGACAAGTGATGATCTTGCTTCTTTGACTGTGGTGACTAAAAGTTATATAAGCCTGGACCATCTTGCAGATATACCCCATGGATCTAAGTCAGATATCTGGTCATTGGTAAGCTATATGTATGATAATGATGCTCACAAACCAACCTTTGAAGCAATTGAATTAATGTCTCTGGGGAAGAAGAGTATGCTGCGGAAAAATCCCAAGCATAGGCAAAGTGCTGCAGAGCTACCAAACTATTATCATCTTCAACTTTATATACTTAATGTCATATATGATACTGAGGTCGGACCAGCCAGTCATAACACTCCTAGAAGAAGCTGA 501 0.3952 MEEPFLKSILSFSSAPNRIARFNFRFLFRDGVLLFPSQIKQGSSPSRIVKLGDFGLIKMLTSDDLASLTVVTKSYISLDHLADIPHGSKSDIWSLVSYMYDNDAHKPTFEAIELMSLGKKSMLRKNPKHRQSAAELPNYYHLQLYILNVIYDTEVGPASHNTPRRS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03147 166 Gene3D Transferase(Phosphotransferase) domain 1 32 145 - -
Trre15g03147 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03147 166 SUPERFAMILY Protein kinase-like (PK-like) 46 147 IPR011009 -
Trre15g03147 166 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03147 Trre-Chr15 29167566 29169657 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Trre15g03147 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03147 K08857 - csv:101207766 111.694