Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03146 ATGGGAGTTGTTCAGAAGGGTTTACGGCCCACCATCCCCAAGAGCACTAATACAAAGTTAGTTCAAATTCTTGAGAGGTCTTGGCAGCAAGATCCAACTTTAAGACCCGATTTCTCTGAAATTATCGAGATCCTGCAGCAGTTGGCGAAGGAGGTTGGAGATGAAGGAGAGGGGCACAAGGACAAATCGGAAGGATTTCTGTCTGTCCTCAGACGAGGTCATCGCTAA 228 0.4737 MGVVQKGLRPTIPKSTNTKLVQILERSWQQDPTLRPDFSEIIEILQQLAKEVGDEGEGHKDKSEGFLSVLRRGHR 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03146 75 MobiDBLite consensus disorder prediction 52 75 - -
Trre15g03146 75 Pfam Protein tyrosine and serine/threonine kinase 4 45 IPR001245 GO:0004672|GO:0006468
Trre15g03146 75 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
Trre15g03146 75 SUPERFAMILY Protein kinase-like (PK-like) 4 50 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03146 Trre-Chr15 29143181 29144861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03146 1 75 MAP Kinase Kinase Kinase AT4G35780 64.000 2.88e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trre15g03146 PK_Tyr_Ser-Thr 1.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03146 - - gmx:100805180 126.716