Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03131 ATGTCTTCACTCTTCCAAGACACCAACATAAAAGATTGGTTCAGCGGTACTGACAACAAAACACTCATCGTAACATTCTTAATAATTACCACAGTAATTTGGTATTTTTATCTCTTCTTCATCAAATCCAAAGCCCAGAACCTTCCACCGGGCCCACCGGGCCTTCCTTTCTTCGGTAACCTTCTATCTCTCGACCCAGAACTTCACACTTACTTCGCCGACCTGGCCCAAACCCACGGCCCAATTTTCAAACTCGGGCTCGGCAGCAAACTCGGAATCGTGTTAACTTCACCTTCCACGGCGCGTGAAGTTCTAAAAGACCACGACACCGTTTTCGCCAACCGTGACGTTCCCGCCGCCGGTAGAGCCGCCACATACGGCGGCACAGATATAGTATGGAGCCCGTATGGACCAGAATGGAGGATGCTGAGAAAAGTCTGCGTACTCAAGATGCTTAGCAACACGACTCTTGACTCCGTTTACGAGCTCCGGCGAGGTGAAGTTCGGAAAACGATCGTGTCTATTCACGACCGGGTCGGGTCAACGGTGAATATTGGGGAGGAAGTTTTTCTGACGGTGTTGAATGTAATTACGAACATGATGTGGGGTGCGGCGGTGGAAGGGGAAGAGAGGGTAAGTTTAGGGGCGGAGTTCAGGGAGACGGTGGCGGGAATTGTACATCTTTTAGGGAAACCGAATTTGTCGGATTTTTTCCCCGGGTTGGCCCGATTCGATTTGCAAGGTGTGGTGAAAGAGATGGATGTATTGGTTCCACGTTTTGATAGGATATTTGAAAAAATGATTGGTGAACGTAAGAAGAAGGAAGTGGAAGGGAAAGAAAATGAAAGTAAGGATTTTCTGCAGTTTTTGTTGAATTTGAAGGATGAAGGTGATTCTAAGACTCCATTCACAAGTACCCATGTTAAGGCTCTACTCATGGACATGGTTGTCGGTGGATCAGACACATCCTCCAACACAATTGAGTTTGCACTGGCAGAAATGCTGAACAACCCAGAAGTATCAGAGAAATTTGGTATTGTTCTCAAAAAGAAGACACCTCTACTTGCCATACCCACGCCGCGACTTTCCAATCCAGAGCTTTATAAAAACAATTGA 1116 0.4677 MSSLFQDTNIKDWFSGTDNKTLIVTFLIITTVIWYFYLFFIKSKAQNLPPGPPGLPFFGNLLSLDPELHTYFADLAQTHGPIFKLGLGSKLGIVLTSPSTAREVLKDHDTVFANRDVPAAGRAATYGGTDIVWSPYGPEWRMLRKVCVLKMLSNTTLDSVYELRRGEVRKTIVSIHDRVGSTVNIGEEVFLTVLNVITNMMWGAAVEGEERVSLGAEFRETVAGIVHLLGKPNLSDFFPGLARFDLQGVVKEMDVLVPRFDRIFEKMIGERKKKEVEGKENESKDFLQFLLNLKDEGDSKTPFTSTHVKALLMDMVVGGSDTSSNTIEFALAEMLNNPEVSEKFGIVLKKKTPLLAIPTPRLSNPELYKNN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03131 371 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 Pfam Cytochrome P450 49 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 PANTHER OS08G0547900 PROTEIN 21 343 - -
Trre15g03131 371 SUPERFAMILY Cytochrome P450 44 343 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g03131 371 Gene3D Cytochrome P450 41 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03131 Trre-Chr15 28592490 28594498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03131 25 343 Cytochrome P450 AT4G12300 57.276 6.30e-128 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03131 - - gmx:100783085 459.144