Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03122 ATGGGTTATTTCCTTTTCATTGCTCTCACTTTCGTGTCGAGCTTCTATATTCATTTTACTCGAGGAAGTGAATTGCGCCCTACTACCGAAACAAGCAGTTCAAAAATATACATTATTCATGTGAATGAGCCAGAGGGTAAGATGTTTACTCAATCAGATTCTGAACAAGATTTAGAAAGTTGGCACCATTCATTCATGCCAGCTACTGTTATGAGTTCTAATGAACAACCGCGAATGATTTACTCATACCGAAATGTGTTGAGTGGTTTTGCTGCAAGACTCACTCAAGATGAGCTTAGAGCTGTGGAACAGAAAAATGGTTTCATTTCAGCTCATCCCGAAAGGACACTACGTCGTCAAACCACACATACACCAAGTTTCTTGGGGTTGCAGCAAAATATAGGATTGTGGAAGGATTCGAATTTTGGAAAGGGAGTTATTATTGGTGTTCTGGATTCAGGAATCACACCTGGTCATCCTTCATTCGATGATGCAGGAATAGGACCACCGCCATCCAAATGGAAAGGACGATGCGAACTTAATGGTACAGCTTGTAACAACAAACTAATTGGAGCAAGATCCTTCAACAACGCGGTTACTAAAGCTGAGGCGCCAATTGATGAGGATGGACATGGGACTCACACAGCAAGTACAGCGGCTGGTGCTTTTGTCGAAAATGCAGATGTGTTAGGAAATGCTAAAGGTACAGCAGCAGGGATTGCCCCTCATGCTCACCTAGCAATTTACAAAGTGTGCTTTGGTGAAGACTGTCCCGAGAGTGATATACTCGCAGGATTAGATGCAGCTGTGGAGGATGGTGTCGATGTAATATCAATATCGCTCGGTCTAACTGAGCCACCTCCATTTTTCAATGATAGCACTGCCATAGGCGCATTTGCAGCAACCCAAAAGGGAATCTTTGTAAGTTGTGCAGCTGGAAACTCTGGACCTTCTGAAGGCTCCTTGGTTAATGGAGCCCCATGGATCCTCACAGTCGGAGCTAGCACTATCGACAGAAGCATTGTAGCAACAGCAGTGCTAGGAAATGGGGAAGAATTTGATGGTGAATCAGTTTTCCAGCCTTCCGATTTCCATCCAACTTTGTTGCCCTTAGCATTTGCAGGAACGAATGGCAAACCAGAATCTGTATTTTGTGCTAATGGATCCTTGAATGACATTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGGGGAGGGGGTATAGGAAGAATTGCTAAAGGACAGGAAGTAAAAAGAGCAGGTGGTGCCGCCATGATTCTCACGAATGATGAAATCAATGGTTTCAGTCTCTCAGCTGATGTACATGTCCTACCAGCAACACATGTAAGCTATGCTGCTGGACAAAAGATCAAGGACTATATAAATTCAACTTCAACACCTACAGCAACCGTTTCATTTAAAGGAACGATTATTGGAAACTCACAATCCCCAGCCGTTGCGTCCTTCTCTTCAAGAGGTCCCAATTTGCCGAGTCCTGGGATACTAAAACCAGATATTATAGGACCTGGCGTGAACATACTAGCTGCCTGGCCATTCCCCCTGAATAACAGCACCAATTCAAAACTCAATTTCAACATCGAGTCAGGCACATCAATGTCATGCCCACATCTTAGCGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTGATTGGTCGCCAGCAGCCATAAAATCTGCCATAATGACTTCCGCAGACACACTAAGTTTAGAAAACAAACTCATTGTTGATGAAACACTTCAGCCGGCAAATATCTTTGCCACAGGTTCGGGCCATGTGAATCCATCAAGAGCAGATGATCCCGGGTTAGTATATGATATCCAACCTGATGATTATATACCTTATCTATGTGGTTTAGGCTACAGTGATAGGGAAGTTGGGATCATTGCACACAAGAAAATTAACTGCACTGAGACGTCAAGCATTCCTGAAGGAGAGCTTAACTATCCCTCATTTTCTGTCGTGCTTGGCTCCTCACAGACATTCACACGGACAGTGAAAAATGTCGGTGAGGCCTACTCATCTTATGTTGCCATAGTTACGGCACCAAAAGGAGTTGATGTGAAAGTCCAACCAAAAAAGCTTTACTTTTCAGAAGCCAACCAAAAACAGACATATTCAGTGACATTCAACCGTATAGGGTCGGGTAACAAGACAGCAGAATATGCTCAAGGGTTTCTAAAATGGGTCTCTGCTAAACATACTGTCACGAGCCCTATCTCGGCCAAATTTGCATAA 2256 0.4375 MGYFLFIALTFVSSFYIHFTRGSELRPTTETSSSKIYIIHVNEPEGKMFTQSDSEQDLESWHHSFMPATVMSSNEQPRMIYSYRNVLSGFAARLTQDELRAVEQKNGFISAHPERTLRRQTTHTPSFLGLQQNIGLWKDSNFGKGVIIGVLDSGITPGHPSFDDAGIGPPPSKWKGRCELNGTACNNKLIGARSFNNAVTKAEAPIDEDGHGTHTASTAAGAFVENADVLGNAKGTAAGIAPHAHLAIYKVCFGEDCPESDILAGLDAAVEDGVDVISISLGLTEPPPFFNDSTAIGAFAATQKGIFVSCAAGNSGPSEGSLVNGAPWILTVGASTIDRSIVATAVLGNGEEFDGESVFQPSDFHPTLLPLAFAGTNGKPESVFCANGSLNDIDFRGKVVLCERGGGIGRIAKGQEVKRAGGAAMILTNDEINGFSLSADVHVLPATHVSYAAGQKIKDYINSTSTPTATVSFKGTIIGNSQSPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNSTNSKLNFNIESGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTSADTLSLENKLIVDETLQPANIFATGSGHVNPSRADDPGLVYDIQPDDYIPYLCGLGYSDREVGIIAHKKINCTETSSIPEGELNYPSFSVVLGSSQTFTRTVKNVGEAYSSYVAIVTAPKGVDVKVQPKKLYFSEANQKQTYSVTFNRIGSGNKTAEYAQGFLKWVSAKHTVTSPISAKFA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03122 751 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Trre15g03122 751 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Trre15g03122 751 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Trre15g03122 751 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Trre15g03122 751 Pfam Peptidase inhibitor I9 37 118 IPR010259 -
Trre15g03122 751 CDD PA_subtilisin_like 344 471 - -
Trre15g03122 751 ProSiteProfiles Serine proteases, subtilase domain profile. 127 605 - -
Trre15g03122 751 CDD Peptidases_S8_3 120 572 IPR034197 -
Trre15g03122 751 FunFam Subtilisin-like protease SBT1.5 145 383 - -
Trre15g03122 751 Gene3D Peptidase S8/S53 domain 145 618 IPR036852 GO:0004252|GO:0006508
Trre15g03122 751 Gene3D - 622 750 - -
Trre15g03122 751 Pfam Fibronectin type-III domain 652 747 IPR041469 -
Trre15g03122 751 Gene3D - 338 479 - -
Trre15g03122 751 SUPERFAMILY PA domain 358 465 IPR046450 -
Trre15g03122 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 119 IPR037045 -
Trre15g03122 751 SUPERFAMILY Subtilisin-like 120 609 IPR036852 GO:0004252|GO:0006508
Trre15g03122 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 747 IPR045051 -
Trre15g03122 751 Pfam PA domain 384 457 IPR003137 -
Trre15g03122 751 Pfam Subtilase family 143 574 IPR000209 GO:0006508|GO:0008236
Trre15g03122 751 FunFam subtilisin-like protease SBT1.5 338 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03122 Trre-Chr15 28504750 28507005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03122 28 750 Subtilisin-like Serine Gene Family AT1G04110 44.823 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03122 - - gmx:100785376 1213.36