Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03095 ATGGCTTCAAATTTTTGCAAACCTTCGCGCAGTGATAATTCTCTAGTAATGAAAACAAGCAAATATGCTTCAAAGCCTACCCTTTTGCTCAAGGACTATCTCAGGGACGACTTGAGCTCATGTTCATCGAGTGGTTTCAAATCGTTCCCACGACGACAATGCTGCACCACCGTCGGATTCCTACTAGAAAACGATCTCCAAATCAAACGCAACAAGAAGAAAACTACACTTCCTCGACAACGGCCCACCGTAAATGCTCTGCAGAGAGCTTCCGAAGCAGTTATAACTGCCATCAAATCACTGTCCTCACAAAAGAAAGCTTCTACCGGTGTTCTTTCTAGAAGCTTCTCGAGGAGGCTGTTAAGCAGAAGGTTCTGGAGAAAAGCGGCGAAGGAACAGAGAAGTGAAGGTGTACTGAGGTGTAGGAGATCATTCCGGGAACTACTTATGCAGGAAAGAGACTGTAAACCGACGTCGTTTAGTGAGGATAGTATATTTGCTGCCAAAAGCATCACCAGCGTTTCTTATGGTTGTTGCAGTAACAGCTGGGGAGAAAGTGAATTTACGTTTACATCAAACGCTACTTCTTCCGATAGCTCCACCGAAAATGACTTAGTTGATGGCGGCAAAGACGACGCGGCTCCCCCTCAGCACAAGATAGAAGGATTAACACATGGGGATTGGTCAAACGAGAAGGAGCAATTCAGTCCTGTATCAATACTAGATTGCCCATTTCAAGATGAAGAAGAGATGAAGTCTCATTCCATGATCAATTCTTTCTTCCAAGGAGCAGAAAACAAGCATATGCAGAAGACGCAACATTTTGAGAATGTAACGGCTTCACTGGAGCCATTGGTTTTAGAGAAAAGGATCCAATGCTTAGAACTAGAAGATGAACCAAAAAACAAATCTACAAAACAATGTTCAGTATTACAGTCAATTAATCGAAATAACAACGAAGACGAGGATGAGCTAAACATTCTCAAGCTTGTCAAGAATTCAATTCTATCCAACAGTTTGATGATTAACACAGAGAAACTACTGTTTGATTACTTAGAACAATCCATTGAGGAAAATAACAAAGTTAAGAATTATTCAAAGAAGCTTAACCTTTGCAATGTAGTAGAGGATTGGATACAAGGACAACCTCAAGAACCATATTTGGGTTGGGAAGTGAAAGAAGGAAGATATGTTTACATTAGTGAGATTGAAAAAAGTGGAGACTGGAAAAACTCTGATGAAGAAACAGAACAACTTGTTCTAGAGCTGGAAAATGAGGTATTAGCTAGTTTGATTGAAGAGATTGTTCTTGATCTTGTGATATGA 1326 0.4057 MASNFCKPSRSDNSLVMKTSKYASKPTLLLKDYLRDDLSSCSSSGFKSFPRRQCCTTVGFLLENDLQIKRNKKKTTLPRQRPTVNALQRASEAVITAIKSLSSQKKASTGVLSRSFSRRLLSRRFWRKAAKEQRSEGVLRCRRSFRELLMQERDCKPTSFSEDSIFAAKSITSVSYGCCSNSWGESEFTFTSNATSSDSSTENDLVDGGKDDAAPPQHKIEGLTHGDWSNEKEQFSPVSILDCPFQDEEEMKSHSMINSFFQGAENKHMQKTQHFENVTASLEPLVLEKRIQCLELEDEPKNKSTKQCSVLQSINRNNNEDEDELNILKLVKNSILSNSLMINTEKLLFDYLEQSIEENNKVKNYSKKLNLCNVVEDWIQGQPQEPYLGWEVKEGRYVYISEIEKSGDWKNSDEETEQLVLELENEVLASLIEEIVLDLVI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03095 441 MobiDBLite consensus disorder prediction 204 224 - -
Trre15g03095 441 MobiDBLite consensus disorder prediction 191 224 - -
Trre15g03095 441 Coils Coil 311 331 - -
Trre15g03095 441 PANTHER OS04G0572500 PROTEIN 22 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03095 Trre-Chr15 28164167 28167344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03095 9 439 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.508 2.50e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03095 - - tpra:123887284 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03095 15 28164167 28167344 Trre15g03095 15 28164167 28167344 ECH