Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03085 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACTCACAGATTAAGGAGTGAAGGATCAGCACAGTTTCAAGCTTGTCATTTTCAGCTACCATCAATGAGCACACAGAGATTGGATTTACCATGTAGCTTCCCTCGGAAAGACGGTTCTTCGCGTTCGCAACAGACATTGAGGCCGGTTGGGATATCAGTGGAGAAGACTGAAGTCAAGAACAGCAACAACAACAACAGCAGCAGTACTTGTTCTCTGCAACAGAACATTCGGCTACCGCCTTTAGCAACAACTGCACAGACATTGGGAGAGATTAAGGATGAGGAGTTTTGGGAGAAAGGCGGGAGGAGTTTGAAGAGACTTGCAGAACATGGATCTTTGGATGAGTCTTTTACTAATAGGGTTAAGAGGAAAAAGGGTAATAGTGGTGATGAGAATTTTGATGAATTTGAAAGGGAAAGTTTCAGTTTGGCACAATTTGGTGCTGGAAACTTTTGGTCTGTTCATGGTTTTGGAGGGTTTAATAATAGCCCTTCACTTCCTTTCTCTTTGAATTGTTCTGGAGATGAGGAAAGGGTTTGTTTTGCTCCTGCTGAAGTGGTTTCTACACCTTTGCCTTTGTCCAACAATCCTTGGCTTGAATCTGCTGTAACAAAGATCACCAATTTTGGTGAAGGTAGCCATCAGCATCAACATCATCATGTCAACGAAGGTTCGGTTTCTAATGGTTCATCAGAAAGCCAGAGTTTGAGCCTTAGGTTGAATGAGAATGCATCAGAACATGAAGATGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGAACTGAAGTGGAGACAGGTGAAGAGGACGAAGAAGAGGAGCATCGCGGATTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTAGCTGCAATCAACCATTTCATTGCAAAATTGGGTGATCTTGCATCTCCAAGAGGAACCACGATAAGCCGAATTTGTGCTTATTATACAGAAGCCTTAGCCATCAGAGTCACCAGGCTTTGGCCTCATGTTTTTCAAATCACAGCCACTTCTCGCGATTTCGATAGGGTGGTGGATGACGATGAAATGATCACTGCATTGAGGCTTCTTAACCAGGTTACCCCAATTCCAAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATAGACTTTGACATAAAACAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGACTAATCCTCCAAGCCATGTCCGAATCACAGGCGTGGGGGAATCGAAGCAAGAGTTGAATGAAACCGGAGACAGACTAGCAGGATTTGCCGAGGCCTTGAACCTCCCCTTTGAGTTCCATCCTGTGGTGGACAGACTTGAAGATGTTAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTATGCAGCTTCATAAGATCCTTTATGATGGTAGTGGAGGAGCATTGAGGGACTTTTTGGGTCTCATTCGCAGCACCAATCCTACAATGGTGGTTATGGCAGAGCAAGAAGCGGAACACAACGAGGCGAGGTTGGATTCAAGAGTGTGCAATTCGTTAAAATATTACTCGGCGCTGTTTGATTCAATTGATCACAGTGGCCTTCCACTAGAGAGTCCAATGAGGATCAAGATAGAGGAGATGTTTGCCAGGGAGATAAGGAACATCATTGCTTGTGAAGGAAGGGACAGGTTGGAAAGGCACCGGAGTTTTGGGAATTGGAGGAAGATGATGGTGGAGCACGGAGGGTTTCGATGCATGGGAGTCACCGACAGAGAAATGATTCAGAGCCAGTTTCTGTTAAGGATGTATTCTTGTGATAATTACAGTGTTCAGAAGCAGGAGCATGAAGGAGCCACGGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTACACAGTATCTTCTTGGGCACCGGTGGACGCGGCTGGAAGCTCATCCTCTTTCTCTCAGGCAGCTTGA 2046 0.4487 MLAGCSSSTLLSPTHRLRSEGSAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQTLRPVGISVEKTEVKNSNNNNSSSTCSLQQNIRLPPLATTAQTLGEIKDEEFWEKGGRSLKRLAEHGSLDESFTNRVKRKKGNSGDENFDEFERESFSLAQFGAGNFWSVHGFGGFNNSPSLPFSLNCSGDEERVCFAPAEVVSTPLPLSNNPWLESAVTKITNFGEGSHQHQHHHVNEGSVSNGSSESQSLSLRLNENASEHEDGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAINHFIAKLGDLASPRGTTISRICAYYTEALAIRVTRLWPHVFQITATSRDFDRVVDDDEMITALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVMQLHKILYDGSGGALRDFLGLIRSTNPTMVVMAEQEAEHNEARLDSRVCNSLKYYSALFDSIDHSGLPLESPMRIKIEEMFAREIRNIIACEGRDRLERHRSFGNWRKMMVEHGGFRCMGVTDREMIQSQFLLRMYSCDNYSVQKQEHEGATALTLGWLDQPLYTVSSWAPVDAAGSSSSFSQAA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03085 681 Pfam GRAS domain family 294 665 IPR005202 -
Trre15g03085 681 MobiDBLite consensus disorder prediction 235 273 - -
Trre15g03085 681 ProSiteProfiles GRAS family profile. 284 666 IPR005202 -
Trre15g03085 681 MobiDBLite consensus disorder prediction 49 85 - -
Trre15g03085 681 MobiDBLite consensus disorder prediction 45 85 - -
Trre15g03085 681 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 246 662 IPR005202 -
Trre15g03085 681 MobiDBLite consensus disorder prediction 224 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03085 Trre-Chr15 28018221 28020266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03085 1 665 GRAS Transcription Factor Family AT1G63100 55.365 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre15g03085 GRAS 1.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03085 - - tcc:18606459 914.064