Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03080 ATGGCGACAACGAGGTCACCCAACCGTTCATCTGAAGAAACGGCGGATCCGACGCCGTTAATAGGAAGTTCATCTGATGAGTCAAACTCCGGACGGAGAATTCTCCGTGCGCCGAGTCTCCAACAAGCGGCGCGGTTTCTGAGACAAGCGAGTGGACGGAGGTTGATGCGTGAGCCGTCGATGATGGTGAGGGAAACGGCGGCGGAACAATTGGAAGAGAGACAAAGCGATTGGGCTTATTCAAAGCCGGTTGTTATTCTTGATATTCTGTGGAATTTTGCGTTTATTGTTGCGGCTGTTGTTGTGTTGATTTTGAGTCGGGATGAGTCTCCTAGCTCGCCTCTTAGGTTGTGGATTTCAGGATATGCTTTACAGTGTGTTGTTCATGTTGTGTGTGTTTGTTTGGAGTTTCGGAGACGGATGCAGGTGCGGGAACAGTTGATTATCAACGGTGGTAACGTGGCTGGGGGCGGTGGTGGTGGCGGTGGAGGTGGCAGTGGGGAATTGGACTTTGATTCATTGGATGTTTCTGGACAGTATGTCAATTTGGAACAGAATGGGGACTATGGTTCTACAAGGTAA 582 0.5 MATTRSPNRSSEETADPTPLIGSSSDESNSGRRILRAPSLQQAARFLRQASGRRLMREPSMMVRETAAEQLEERQSDWAYSKPVVILDILWNFAFIVAAVVVLILSRDESPSSPLRLWISGYALQCVVHVVCVCLEFRRRMQVREQLIINGGNVAGGGGGGGGGGSGELDFDSLDVSGQYVNLEQNGDYGSTR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03080 193 PANTHER TARGET OF ERK KINASE MPK-1 51 144 - -
Trre15g03080 193 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03080 Trre-Chr15 27864610 27865191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03080 44 140 C3H Transcription Factor Family AT1G68070 59.794 2.00e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03080 - - gmx:100779757 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03080 15 27864610 27865191 Trre9g00404 9 2917776 2921723 PCT