LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g03079	ATGGCGACAACAAGGTCACCCAACCATTCATCAATTGAAACGGCGGATCTGATGCCGTTAATCGGAAGTTCATCCGATGAGTCAAACTCCGGACGGAGAATTCTCCGTGTGCCGAGTCTCCAGCAAGCGGCGCAGTTCCTAAGACAAGCGAGTGAGCGGAGGATGATGCGTGAGCCGTCGATGATGGTGAGGGAAACGGCGGCTGAACAATTGGAAGAAATACAAAACAATTGGACTTATTCAAAGCCGGCGGTGATTATTGATATTCTATTGAATTTCGTGTTCTTTGTTGCGGCTGTTGCTGTAATGATTTTGAGTCGGGATGAGTCTCCTAGCTCGCCTCTTAGGTTGTGGATTTCAGGTCATACTTTACAGCATGTTGTTTATGTTGTGTGTGTTTGTTTTGAGTATCGGAGACGGATGCAGATGCGGGAACAGTTGATCGCCAACGGTGGTAACACAGTTGGGGGTGGTCGACGTCGCAGTGAGGATTTGGACTTCGATTCAATAGAGGGTTCTGGTGTCGATTTGGCGCAGAATTGGGATGATTGTTCTGCAAGTAGCATGGCAAAACATTTGGAATCAGCCAACACAATGTTCTCTTTTATTTGGTGGGTCATTGGATTTTATTGGGTATCAGCTGATGGTCAAGATTTGATCCATGATTCTCCAAAGCTTTACTGGTTATGTATTGTCTTCCTGGGTTTTGATGTTCTCTTTGTCGTTTTCTGTATTGCGCTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCGTGTATCATTGCGCTTCTGTATGCAGTTGCAGACCAGGAAGGGGCGACAAAGGAAGACATTGAGCAGTTGTCAAAATTCAAATTCCAAAGAACAAGTAATGAGAAGCTTGCTGGTAATACACAAGGTCCTGTTGGAGGAATAATGATTGAATGTGAAGCTGATTCCCCAATTGAACATGTGCTTGCTGATGAGGATGCGGAATGTTGCATCTGCCTTTCTGCCTATGATGATGGGGTCGCCAAGTCTAATGCTACATGA	1038	0.4538	MATTRSPNHSSIETADLMPLIGSSSDESNSGRRILRVPSLQQAAQFLRQASERRMMREPSMMVRETAAEQLEEIQNNWTYSKPAVIIDILLNFVFFVAAVAVMILSRDESPSSPLRLWISGHTLQHVVYVVCVCFEYRRRMQMREQLIANGGNTVGGGRRRSEDLDFDSIEGSGVDLAQNWDDCSASSMAKHLESANTMFSFIWWVIGFYWVSADGQDLIHDSPKLYWLCIVFLGFDVLFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFKFQRTSNEKLAGNTQGPVGGIMIECEADSPIEHVLADEDAECCICLSAYDDGVAKSNAT	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g03079	345	PANTHER	TARGET OF ERK KINASE MPK-1	51	339	-	-
	Trre15g03079	345	MobiDBLite	consensus disorder prediction	1	30	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g03079	Trre-Chr15	27856468	27862914	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre15g03079	19	338	C3H Transcription Factor Family	AT1G68070	41.846	1.39e-80	247

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g03079	-		-	gmx:100779757	468.003