Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03067 ATGGAAAATCACCTAAACAGAGAACTCGATCTTCTCCCACCACCGCGAACCGATTCATCCCTCCTCCGTCTCCGATCATCCTCATCGTCGAAATCCGAACGCGGCGGTCCCTCACTCGATCTACAGCTCTCAATCAGCGTTGGTCCACCATCGATGCTGATGTGCGATGGCGTAGAGTCACTGAAATGGGAAGCGTCGGAGCAAATCCGCCTCGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTAAGGGAGTTAACTCGAAGAGAAATGGAAATGGCGCAATCGGAGTTCGCACGTGCTAGACAAATGTGGGAGCGTGCGAGAGAAGAAGTTGAAAAAGCTGAAAGAATCAAAGAAAGAGCAACAAGACAGGTTGATTCAAGTTGTATGGAAATTACCTGTCATTCTTGTAGGCAGAGATTCAGACCTGCTTCTGCTTGA 441 0.5011 MENHLNRELDLLPPPRTDSSLLRLRSSSSSKSERGGPSLDLQLSISVGPPSMLMCDGVESLKWEASEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVEKAERIKERATRQVDSSCMEITCHSCRQRFRPASA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03067 146 MobiDBLite consensus disorder prediction 1 42 - -
Trre15g03067 146 MobiDBLite consensus disorder prediction 20 39 - -
Trre15g03067 146 Coils Coil 83 124 - -
Trre15g03067 146 PANTHER OS03G0310200 PROTEIN 26 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03067 Trre-Chr15 27793196 27793636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03067 42 142 C2H2 Transcription Factor Family AT2G01940 34.615 3.98e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03067 - - var:108340281 189.504