Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03054 ATGAGAAAAACAATGTCTTCATCCATTTATCATACCTTATTGTTACTTCTCCTTTGCTTTCTTCTCCATAAACCCACCCAAGCAATCAAAAAGTCCTACATTGTATACTTAGGACCACAATCTTATGGTTCAAGTCTTTCAACTCTTGATGTTCAATCTGTCACAAACTCTCATTATAATTTGCTTAGCTCATTCGTTGGAAGCACAAAGAAGGCCAAAAAAGCAATCTTTTATTCTTATAGTAAATATTTTAACGGATTCGCCGCAGTTCTTGATGAAGATGAAGCTGCAATGGTTTCAAAGCATCCTGATGTGGTATCAATTTTCTTAAACAAAGCAAGAGAACTTCACACAACTCATTCATGGGATTTTCTTGGATTAGAAAGAAATGTTATTCAAAAGAGTTCATTATGGAGCAAAACCAAAGGAGAAGATATCATTATTGGGAATCTAGATACCGGTGTTTGGCCCGAATCAAAGAGCTTTAGTGATGAAGAGATGGGTCCAGTCCCAACTAGGTGGCGGGGAATTTGTGATGTTGACAAAAATAATACGGATAAATTTCACTGCAACAGGAAGCTGATTGGAGCAAGATATTTTTACAAAGGCTATTTAGCAAATCTTGGTAAAAAACAAAACATGTCATTTCATAGTGCTCGTGACATTGATGGTCATGGTTCACATACTTTATCAACTGCCGGAGGAAATTTCGTTGCCAATGCAAGTGTGTTTGGCAATGGTAAAGGAACAGCAAGTGGTGGATCACCAAAAGCCCGAGTTGCGGCCTATAAGGTGTGTTGGCCACCCCTTGCCACGGGTGGCGGATGTTACGAAGCAGACATTTTGGCTGCTTTTGAAGCCGCCATAAGTGATGGCGTTGATGTTCTTTCGGTGTCTTTAGGTGGCAATAACGTCGAATTTTTCAAAAGCAGTATTTCTATAGGGTCTTTTCATGCAGTTGCCAAGGGCATTGTTGTAGTTAGTTCTACAGGAAATTCAGGACCTACTCCCTTCAGTGCATCCAACTTGGAACCATGGATGATCACAGTTGCTGCAAGCACAATGGATAGATCTTTTACTAGTTATGTTACTCTTGGTAACAAGAAAATATTCAAGGGAGCTAGTCTTTCAGAGTCCAACTTGCCACCTCACAAGTTTTATCCATTAATAAGTGCAATTGATGCCAAAGCTGTTGATGCTTCTTCTGCCAATGCTCTTCTTTGCAAAAATGGAACTCTGGATCCAAAAAAGGCTAAAGGAAAAATTGTTGTATGTCTTCGAGGTGTAAATGATAGAACTGATAAGGGTGTGCAAGCTGCTCATGCAGGTGCTGTTGGTATGGTTTTGGTTAATAATGAAGAATCAGGGAATGAAATTCTAGCTGATCCTCATGTTCTTCCTGCTTCACATCTTACCTTCAAAGATGGCACCTACCTTTTTAATTACATTAACACCACTAGGTCGCCTATGGCTTCAATTTGTAGAGTGGAAACACAATTGGGGGTAAAGCCAGCTCCAGTTATGGCTTCATTTTCAGCAAGAGGACCTAATATTATTGATCCATCAATCCTCAAGCCCGACATCACAGCACCGGGAGTCGATATAGTTGCTGCTTTTAGTGAAGTTGCATCTCCCTCTGAACAAAAATCTGATAAACGCAAATCTTCTTTCATTTCTTTGTCCGGAACTTCAATGTCATGTCCTCATGTTTCTGGTGTTGTTGGTTTAATCAAATCTCTTCATCCTGATTGGAGTTCGGCTGCTATTAAGTCGGCAATTATGACCACAGCAAGAATAAAAGATAATACCGGAAAGCTTTTGTTGGATTCCTCGCTGGAAAATGCTACTCCATTTGCATATGGTGCGGGGCACATCCAACCTAATCGTGCTGCGGATCCTGGACTTGTTTATGACCTAAATGTTACTGATTATATGAACTATTTGTGCAACCGTGGCTACAAGGGTTCTCATCTTAGCGTGTTCTACCGCAAACAGTATACTTGTCCAAAATCTTTCAATATATTAGATTTCAATTATCCGACAATCTCAATTTCCAAATTTAAGATTGGACATTCTATAAATGTTACCCGTACTCTTACCAATGTTGGGCCCCCAAGCACATATAGAGTTCGCATTGCAATGCCTCGAGAAGTTTTTGTCTCCATCGAGCCAAAGGTACTAAACTTTAAGGCAAAGGGTGAAAAGAGAGAGTTTAGAATCACTTTGAATTTGAGATCTTTAACTAACTACAGTAATAGTAATGATTATGTATTTGGGAGGTTGGATTGGACTGATGGCAAGCATCATGTTAGGAGTTATATTGCAATTAACCCACAATTATGA 2343 0.3948 MRKTMSSSIYHTLLLLLLCFLLHKPTQAIKKSYIVYLGPQSYGSSLSTLDVQSVTNSHYNLLSSFVGSTKKAKKAIFYSYSKYFNGFAAVLDEDEAAMVSKHPDVVSIFLNKARELHTTHSWDFLGLERNVIQKSSLWSKTKGEDIIIGNLDTGVWPESKSFSDEEMGPVPTRWRGICDVDKNNTDKFHCNRKLIGARYFYKGYLANLGKKQNMSFHSARDIDGHGSHTLSTAGGNFVANASVFGNGKGTASGGSPKARVAAYKVCWPPLATGGGCYEADILAAFEAAISDGVDVLSVSLGGNNVEFFKSSISIGSFHAVAKGIVVVSSTGNSGPTPFSASNLEPWMITVAASTMDRSFTSYVTLGNKKIFKGASLSESNLPPHKFYPLISAIDAKAVDASSANALLCKNGTLDPKKAKGKIVVCLRGVNDRTDKGVQAAHAGAVGMVLVNNEESGNEILADPHVLPASHLTFKDGTYLFNYINTTRSPMASICRVETQLGVKPAPVMASFSARGPNIIDPSILKPDITAPGVDIVAAFSEVASPSEQKSDKRKSSFISLSGTSMSCPHVSGVVGLIKSLHPDWSSAAIKSAIMTTARIKDNTGKLLLDSSLENATPFAYGAGHIQPNRAADPGLVYDLNVTDYMNYLCNRGYKGSHLSVFYRKQYTCPKSFNILDFNYPTISISKFKIGHSINVTRTLTNVGPPSTYRVRIAMPREVFVSIEPKVLNFKAKGEKREFRITLNLRSLTNYSNSNDYVFGRLDWTDGKHHVRSYIAINPQL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03054 780 Gene3D Peptidase S8/S53 domain 145 644 IPR036852 GO:0004252|GO:0006508
Trre15g03054 780 SUPERFAMILY PA domain 403 485 IPR046450 -
Trre15g03054 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 117 IPR037045 -
Trre15g03054 780 CDD PA_subtilisin_like 362 493 - -
Trre15g03054 780 FunFam Subtilisin-like protease SBT1.5 145 369 - -
Trre15g03054 780 Pfam Fibronectin type-III domain 676 776 IPR041469 -
Trre15g03054 780 FunFam Subtilisin-like protease SBT5.3 22 117 - -
Trre15g03054 780 Gene3D - 648 778 - -
Trre15g03054 780 ProSiteProfiles Serine proteases, subtilase domain profile. 121 631 - -
Trre15g03054 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Trre15g03054 780 FunFam subtilisin-like protease SBT1.5 356 500 - -
Trre15g03054 780 SUPERFAMILY Subtilisin-like 116 635 IPR036852 GO:0004252|GO:0006508
Trre15g03054 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 775 IPR045051 -
Trre15g03054 780 CDD Peptidases_S8_3 115 597 IPR034197 -
Trre15g03054 780 Pfam PA domain 408 478 IPR003137 -
Trre15g03054 780 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Trre15g03054 780 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Trre15g03054 780 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Trre15g03054 780 Pfam Subtilase family 143 623 IPR000209 GO:0006508|GO:0008236
Trre15g03054 780 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Trre15g03054 780 Gene3D - 356 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03054 Trre-Chr15 27640992 27646154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03054 21 777 Subtilisin-like Serine Gene Family AT5G59810 57.895 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03054 - - vun:114175516 1000.73