Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03050 ATGGCCGCCACCACAACCACCAGTCTAGGCGGAGCCACTGGCGGCGGAGACGATCGAGTTCTCGCAACAGCACAACAGATCTTAAAAAGCCTTAAAGCTCCAAAAGAAGATCGTGAAGACATGCTGTTAATCTTCTCCACCTTTGATAATCGTCTCTCCGGCATCACTGACCTAATCAACGGCGACGATTCAAAATCCTCCGATGGTGCCGATGATGATGACGACGAAGACCTTGACCGTTTCGAAGCCGCCGAGAAAGTCATTCTCGTTGACGCTTCCACCTACACCGAGCCGTCGCGTCAATCTACTTCGCTTTTCGATCCTCCGAATGATCCGGTTGAGTATTTCACCGCAGTTGATGAGATTATTCAGTGGATGGAACACTTTACCATCGCGCCGCCGCATCAATCGGCGGGGAAAACCGGTCAGATCATTTTGGACCGTGCTGAGAACGCGATCCAGCTTGCTATGTCGAGGCTTGAGGATGAGCTTCGTCATATGCTGATTTGTAATACTGTCCCGCCGGATTCTGTTAGCCGGTGCAGCACTAATAGGAGGAATTCGTTATCTTTCAGTGTGAACGACGGTGCGATCGATGATAATTCTAGCAGCTTTGGTGATGTAAGTGGTCCTGATTCTCATCGGTTTCATGAACGTGGTGTTAGTCTTGGAGATGATTTGTTTGTTGATTTGGTTCGGCCGGAATCGATTATGAATCTGAAAGATATTATTGATCGTATGATTAGGTCTGGTTATGAGATGGAGTGTCTTCAGGTTTATAGCAGTGTTCGTCGTGACGCTTTGGTTGAGTGTTTGGCGATTCTTGGTGTTGAGAAGATGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAAATGAAGAATTGGGTGCAAGCTGTTAAGGTTGTTTTTGGGGTTTTGTTGAGTGGGGAGAAGAGGCTTTGTGATAGTCTTTTTGGTGATTTGGATGATTTGAAGGAGATGTGTTTCAATAAAACTGCTAAGGGTTGTGTTATGATGTTGTTGAATTTTGGTGAAGCTGTTTCCATTTGTAAGAGGTCGCCTGAGAAGTTGTTTAGGATATTGGATATGTATGAAGCTTTGAGAGATGGTTTGCCTGATTTGGAGGATATGGTGACGGAGGAGTTTGTGATCACCGAGGCTAAGGGTGTGCTTAGGGGACTTGGTGAGGCTGCAAAAGGGACATTTTCTGAATTTGAGAGTTGTATTCGGAATGAGACTTCTAGAAAGCCGGTTCTAACAGGGGATGTTCATCCTTTGCCTAGGTATGTTATGAATTACCTGAAACTGCTTGTGGATTATGGCGATGCCATGGATTCGCTTTTGCAAATCAGTGAAGAGGCTCTTTACCGATTTACAAATGATTTGGGCGGTGATGGTTCCCAGTTAGAGGCTTTGTCCCCTTTAGGACGGCAAATACTGTTGTTGATGTCTGAGCTTGAGTACAATCTCGATGAAAAATCAAAACTTTATGAAGACAGTGCATTGCAGCAGGTGTTTTTGATGAACAATCTTCATTATCTAGTGCGCAAAGTGAAGGACTCAGATCTTAGAGCGCTCTTGGGAGATGATTGGGTTCGTAAACGCCGTGGTCAAGTACGGCAGTATGCTACGGGATACCTCAGAGCCTCTTGGAGCAAAGCCTTGTCTTGTTTGAAGGATGAAGGGATCGGAGGGAGCTCTAATAATGCATCAAGGGTGGCTTTGAAGGAGAGGTTCAAGAATTTCAACGCATGTTTTGAAGATATATACAGGGTTCAGACAGCTTGGAAGGTACCTGATGATCAGCTTCGTGAAGAGATGCGGATAAATATATCAGAGAAGGTGATTCCTGCATACCGCTCATTTATGGGGCGATTTAGCGGGCAGCTGGAGGGAAGACATGCAGGCAAATACATTAAGTATATACCAGAGGATCTAGAGACTTATTTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAAAAGAAAGAGTTAG 2022 0.4486 MAATTTTSLGGATGGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSDGADDDDDEDLDRFEAAEKVILVDASTYTEPSRQSTSLFDPPNDPVEYFTAVDEIIQWMEHFTIAPPHQSAGKTGQIILDRAENAIQLAMSRLEDELRHMLICNTVPPDSVSRCSTNRRNSLSFSVNDGAIDDNSSSFGDVSGPDSHRFHERGVSLGDDLFVDLVRPESIMNLKDIIDRMIRSGYEMECLQVYSSVRRDALVECLAILGVEKMSIEEVQKVEWKSLDEKMKNWVQAVKVVFGVLLSGEKRLCDSLFGDLDDLKEMCFNKTAKGCVMMLLNFGEAVSICKRSPEKLFRILDMYEALRDGLPDLEDMVTEEFVITEAKGVLRGLGEAAKGTFSEFESCIRNETSRKPVLTGDVHPLPRYVMNYLKLLVDYGDAMDSLLQISEEALYRFTNDLGGDGSQLEALSPLGRQILLLMSELEYNLDEKSKLYEDSALQQVFLMNNLHYLVRKVKDSDLRALLGDDWVRKRRGQVRQYATGYLRASWSKALSCLKDEGIGGSSNNASRVALKERFKNFNACFEDIYRVQTAWKVPDDQLREEMRINISEKVIPAYRSFMGRFSGQLEGRHAGKYIKYIPEDLETYLLDLFEGSPAVLHHIKRKS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03050 673 Coils Coil 669 673 - -
Trre15g03050 673 Pfam Exo70 exocyst complex subunit 298 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre15g03050 673 Coils Coil 146 166 - -
Trre15g03050 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 79 661 IPR004140 GO:0000145|GO:0006887
Trre15g03050 673 SUPERFAMILY Cullin repeat-like 109 660 IPR016159 -
Trre15g03050 673 Gene3D Exocyst complex component Exo70 97 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03050 Trre-Chr15 27555716 27557737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03050 18 673 EXO70 exocyst subunit family AT5G50380 56.287 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03050 K07195 - gmx:100809716 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03050 15 27555716 27557737 Trre15g03050 15 27555716 27557737 ECH