Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03041 ATGAACAACAACGAGGATATTTTGGGAAACGCTTCTGATGATGAAGATGAATCCGAAGAGGCTACAGTTTTCCAAGCCCTGTTGCTGACGAGAACCGTGATTCGTCTCACAAGCGCGCTAAGTTCTACAAGTGAGTTTTTTGCGGGAACTGTTCGGAATCCTCGTTACATCTGCTGTGCCTGGGTCCAAGAAATCATTGGAAAATGCAGTTATGGTGTTGTTTGTTCTGCAATTGACATTCATATTGGTGAAAAAGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCAGATGCCACAAGGATACTACGAGAAATCAAGCTCTTACGCTTGCTCCGACATCCTGATCTGCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTGTTAG 414 0.4155 MNNNEDILGNASDDEDESEEATVFQALLLTRTVIRLTSALSSTSEFFAGTVRNPRYICCAWVQEIIGKCSYGVVCSAIDIHIGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDLHQVIKANDDLTPEHHQFC 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03041 137 SUPERFAMILY Protein kinase-like (PK-like) 62 125 IPR011009 -
Trre15g03041 137 Pfam Protein kinase domain 63 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03041 137 Gene3D Phosphorylase Kinase; domain 1 52 137 - -
Trre15g03041 137 ProSiteProfiles Protein kinase domain profile. 60 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03041 137 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 61 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03041 Trre-Chr15 27446543 27447153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03041 44 136 MAP Kinase Gene Family AT3G18040 59.836 2.11e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre15g03041 Pkinase 8.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03041 - - cave:132184076 120.938