Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03004 ATGAAGAAGGTGACAGTAATTGTGTCCATTTTTCTGTTCTCAATACTCTCTTTTCAACAATCCCTACACGTTTCATCCTCGCCTCTCTCACACCAAAACCAGGTTTACGAGGAATCGTCTGATGGAAGTAGAAATCAAAAACAGGAGCAAGAGCGTGTTCCTGAAGTGCGTTGCTCCAGAGAGAGAAGTAGGGCTGCTTGGAAAATAATAGAGGAGTATTTGACACCATTTGTGGAGAAAGAAAACTATCAGTTGTCAAGAAAGTGCAGACTTCATTTTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATTTACCTTGACAGGAATGAATGGCAGTGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAATTTATTGATCAGCATTTAGATAACAGGCACTACAATCTTCTGGATCTGAGTCATGGAAAATGCTTGGCTGATCTATGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGCGAGGGTCCATCAGCGAGCCGTCTTCACGAATTGTTTCTGCACCAATTTTGTGATGCTCACATCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTCTTTCTTTATTTGATACAGAGTGATATGAAGGGTCGAAATCAAGAGCTTCGTCGCATCTCCAAAGCTGGATGGAAAGTAAAGCCATCATGA 840 0.4238 MKKVTVIVSIFLFSILSFQQSLHVSSSPLSHQNQVYEESSDGSRNQKQEQERVPEVRCSRERSRAAWKIIEEYLTPFVEKENYQLSRKCRLHFENDMFRDQEEHKIYLDRNEWQCGYCKKSFREEKFIDQHLDNRHYNLLDLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHELFLHQFCDAHICSGKHKPFSRGGKDQGSFFRLAAGALILVLLPVFYLFLYLIQSDMKGRNQELRRISKAGWKVKPS 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03004 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Trre15g03004 279 MobiDBLite consensus disorder prediction 33 55 - -
Trre15g03004 279 PANTHER ZINC FINGER PROTEIN-RELATED 5 278 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre15g03004 Trre-Chr15 27101768 27105257 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03004 38 279 C2H2 Transcription Factor Family AT5G63280 60.656 1.62e-105 306