Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03003 ATGACTTCCCCGTCTAATTTCAGATTACCAGCGAATAAGCAAATGAAGAAGGTGACAGTAATTGTGTCCATTTTTCTGTTCTCAATACTCTCTTTTCAACAATCCCTACACGTTTCATCCTCGCCTCTCTCACACCAAAACCAGGTTTACGAGGAATCGTCTGATGGAAGAAATCAAAAACAGGAGCAAGAGCGTGTTCCTGAAGTGCGTTGCTCCAGAGAGAGAAGTAGGGCTGCTTGGAAAATAATAGAGGAGTATTTGACACCATTTGTGGAGAAAGAAAACTATCAGTTGTCAAGAAAGTGCAGACTTCATTTTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATTTACCTTGACAGGAATGAATGGCAGTGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAATTTATTGATCAGCATTTAGATAACAGGCACTACAATCTTCTGGATCTGAGTCATGGAAAATGCTTGGCTGATCTATGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGCGAGGGTCCATCAGCGAGCCGTCTTCACGAATTGTTTCTGCACCAATTTTGTGATGCTCACATCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTCTTTCTTTATTTGATACAGAGTGATATGAAGGGTCGAAATCAAGAGCTTCGTCGCATCTCCAAAGCTGGATGGAAAGTAAAGCCATCATGA 879 0.4232 MTSPSNFRLPANKQMKKVTVIVSIFLFSILSFQQSLHVSSSPLSHQNQVYEESSDGRNQKQEQERVPEVRCSRERSRAAWKIIEEYLTPFVEKENYQLSRKCRLHFENDMFRDQEEHKIYLDRNEWQCGYCKKSFREEKFIDQHLDNRHYNLLDLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHELFLHQFCDAHICSGKHKPFSRGGKDQGSFFRLAAGALILVLLPVFYLFLYLIQSDMKGRNQELRRISKAGWKVKPS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03003 292 ProSitePatterns Zinc finger C2H2 type domain signature. 128 149 IPR013087 -
Trre15g03003 292 PANTHER ZINC FINGER PROTEIN-RELATED 17 291 - -
Trre15g03003 292 MobiDBLite consensus disorder prediction 47 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03003 Trre-Chr15 27101726 27105257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03003 47 292 C2H2 Transcription Factor Family AT5G63280 60.484 3.26e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03003 - - gmx:100780668 457.218