Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03002 ATGACTTCCCCGTCTAATTTCAGATTACCAGCGAATAAGCAAATGAAGAAGGTGACAGTAATTGTGTCCATTTTTCTGTTCTCAATACTCTCTTTTCAACAATCCCTACACGTTTCATCCTCGCCTCTCTCACACCAAAACCAGGTTTACGAGGAATCGTCTGATGGAAGTAGAAATCAAAAACAGGAGCAAGAGCGTGTTCCTGAAGTGCGTTGCTCCAGAGAGAGAAGTAGGGCTGCTTGGAAAATAATAGAGGAGTATTTGACACCATTTGTGGAGAAAGAAAACTATCAGTTGTCAAGAAAGTGCAGACTTCATTTTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATTTACCTTGACAGGAATGAATGGCAGTGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAATTTATTGATCAGCATTTAGATAACAGGCACTACAATCTTCTGGATCTGAGTCATGGAAAATGCTTGGCTGATCTATGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGCGAGGGTCCATCAGCGAGCCGTCTTCACGAATTGTTTCTGCACCAATTTTGTGATGCTCACATCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTCTTTCTTTATTTGATACAGAGTGATATGAAGGGTCGAAATCAAGAGCTTCGTCGCATCTCCAAAGCTGGATGGAAAGTAAAGCCATCATGA 882 0.4229 MTSPSNFRLPANKQMKKVTVIVSIFLFSILSFQQSLHVSSSPLSHQNQVYEESSDGSRNQKQEQERVPEVRCSRERSRAAWKIIEEYLTPFVEKENYQLSRKCRLHFENDMFRDQEEHKIYLDRNEWQCGYCKKSFREEKFIDQHLDNRHYNLLDLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHELFLHQFCDAHICSGKHKPFSRGGKDQGSFFRLAAGALILVLLPVFYLFLYLIQSDMKGRNQELRRISKAGWKVKPS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03002 293 MobiDBLite consensus disorder prediction 47 69 - -
Trre15g03002 293 ProSitePatterns Zinc finger C2H2 type domain signature. 129 150 IPR013087 -
Trre15g03002 293 PANTHER ZINC FINGER PROTEIN-RELATED 17 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03002 Trre-Chr15 27101726 27105257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03002 52 293 C2H2 Transcription Factor Family AT5G63280 60.656 2.94e-105 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03002 - - gmx:100780668 452.981