Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02994 ATGAGAGGATTAAACATGGAGGACTACCAGCCAATAATGGTCATGGTGTTAATACAGTTTATATATTCAGGTATGACTCTCGGCACAAGAATTGGACTTTTGGAGGGTATGAGCCCAAGGGTATTTGTGGTATACCGTCATGCTTTTGCAACCATTTTTATTGCTCCCATTGCTTATTTATCTGGGAGAAATTCTGCCTCCTATTCCTTAAACTTAAGGAGTTTTTCCCTGATATTCTTGACCTCACTAATTGGTATTACGTTGAGTCAAAATTTATATTTTGAGGGTCTATATCTTGTTCCTTCTTCAATTGCAAGTGCCATGACAAATCTTATTCCAGCAATCACATTTGTAATAGCATCCTTTGTAGGAATGGAAAAAGTCAATATTCAAAGTTTGAGAACTATAGCTAAAATTATTGGGACAGTGATATGTGTTAGTGGAGCAGTTTCCATTGCATTGTTAAAGGGTCCAAAACTACTAAATGCAGAAAAAATACCTTCAAAATCAACCAAGGACACAATCTTGAGAAGTGATGATAATTGGTTGCTTGGTTGTTTGTTTCTTTTGGGAAGTAATGTTGCCTATTCAATTTGGATCATTTTGCAGGTTCCAGCTTATGCAAGCCATCCTAATTCTATATCACTTTCAGCTTGGATGTGTTTAATGACAACATTACAATCATTAGTAGTGACACTATTTTTGGAGCCAGACCTAAATTCATGGAAAATTAATACTCTGCTTCAATTTGGTTGCATTTTATATTCAGGGGTTATGGGGTCTGGAGTAGCATTCTTTCTCCAAGCATGGTGCATTTCAAGGAGAGGGCCTCTTTTCTCTGCTATGTTTGCTCCTATTTTCACATTATTTGTGACTGTAATGGCTGCCTTCTTGCTTCATGAAGAAATATACATTGGAAGCTTGATAGGTGCAATTGGAGTGATTATTGGTTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTCATAGAGAAGACATATCCAAAATCAGTGGTTAATGTGACACATGAAATTGTTGACAATGAATCTTGTGGAAGAACATATTCCAAAATTGATTTGGAAGAGCCTCTTTTAATCTATGAATCTACAATACACTAG 1119 0.3619 MRGLNMEDYQPIMVMVLIQFIYSGMTLGTRIGLLEGMSPRVFVVYRHAFATIFIAPIAYLSGRNSASYSLNLRSFSLIFLTSLIGITLSQNLYFEGLYLVPSSIASAMTNLIPAITFVIASFVGMEKVNIQSLRTIAKIIGTVICVSGAVSIALLKGPKLLNAEKIPSKSTKDTILRSDDNWLLGCLFLLGSNVAYSIWIILQVPAYASHPNSISLSAWMCLMTTLQSLVVTLFLEPDLNSWKINTLLQFGCILYSGVMGSGVAFFLQAWCISRRGPLFSAMFAPIFTLFVTVMAAFLLHEEIYIGSLIGAIGVIIGLYIVLWGKAEDVIEKTYPKSVVNVTHEIVDNESCGRTYSKIDLEEPLLIYESTIH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02994 372 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020
Trre15g02994 372 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Trre15g02994 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Trre15g02994 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 325 - -
Trre15g02994 372 PANTHER WAT1-RELATED PROTEIN 8 328 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02994 Trre-Chr15 26942353 26946221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02994 5 365 Nodulin-like Gene Family AT4G30420 51.762 1.36e-131 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02994 - - gmx:100812331 474.167