Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02979 ATGCAAATCAACACCCAAACAATACCAACCGATTTTCATAACACTCGGGTCTTACCCGAATACGATGTCTTTATTCATACTTCTGATGGCACACGCATTCCAGCTCACACAAGCATCCTGGCCTCGGTGTCGCCAGTTTTCGAGAATATTCTAGAACAACCGCGTAAACAGCGAAGCTCCGAAAGAGTAATCAAAATCCACGGTGTTCCTTCAACAGCCGTAACCGCTTTCATCAGCTTCCTTTACTCATCCAGGTGTACGGAGGATGAAATGGACAAATACGGAATCCACCTGCTTGCACTATCTCACATGTACAACGTGCCACAACTGAAACAGAAATGCATCAAAGGCCTTGTTCAACGGTTAACTATAGAAAACGTGGTGGATGTACTCCAACTCGCGAGACTCTGCGACGCACCGGATCTCCGTCTCCGATGTATGAAACTACTCACCAATCACTTCAACGCGGTGCAAAAATCCGAAGGATGGAAGTTCCTCACCAAACACGATCCCTGGCTTGAACTCGATATCCTTCACTTCATGGACGAAAGTGAAACGAGGAGAGAGAAATCGAGGAGGCACAGGGAGGAGCAGGGGCTATACGCGGAACTGAGCGAGGCGATGGAATGTTTGGAACATATATGTACGGAAGGTTGCACTGATGTTGGACCATATCATGTGGAGGTTGATAGAGAGAGGAAGCCATGTAGCAAATTCTCAACTTGTCAAGGTCTTCAGCTTCTGATTCGCCATTTCGCGACGTGCAAGAGGAGGGTGAAGGGAGGTTGCTGGCGGTGCAAGCGAATGTGGCAGCTGTTTAGATTGCATTCATATGTTTGTCAACAAACGGATGATTCCTGCAATGTTCCTCTTTGCAGACAATTTCAATTGAAAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAGTGGAAACTACTAGCAAGAAAAGTGGCCTCAGCTAAAGTCATGTTTTCCTTGTCTCTTCCTAAGAGAAAGAGAGATGAAGAAATGAGAGTGACCATAGATAATCGTGGGATAAGATGTTTTGGTTACAATAAATATTGTAACAATGTAAAAGACAATCGATGCATTTCATGTTGA 1101 0.4496 MQINTQTIPTDFHNTRVLPEYDVFIHTSDGTRIPAHTSILASVSPVFENILEQPRKQRSSERVIKIHGVPSTAVTAFISFLYSSRCTEDEMDKYGIHLLALSHMYNVPQLKQKCIKGLVQRLTIENVVDVLQLARLCDAPDLRLRCMKLLTNHFNAVQKSEGWKFLTKHDPWLELDILHFMDESETRREKSRRHREEQGLYAELSEAMECLEHICTEGCTDVGPYHVEVDRERKPCSKFSTCQGLQLLIRHFATCKRRVKGGCWRCKRMWQLFRLHSYVCQQTDDSCNVPLCRQFQLKMEQEKRKDDPKWKLLARKVASAKVMFSLSLPKRKRDEEMRVTIDNRGIRCFGYNKYCNNVKDNRCISC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02979 366 SUPERFAMILY TAZ domain 196 296 IPR035898 -
Trre15g02979 366 Gene3D - 123 193 - -
Trre15g02979 366 ProSiteProfiles BTB domain profile. 21 90 IPR000210 GO:0005515
Trre15g02979 366 Pfam TAZ zinc finger 205 292 IPR000197 -
Trre15g02979 366 SUPERFAMILY POZ domain 21 119 IPR011333 -
Trre15g02979 366 Gene3D Potassium Channel Kv1.1; Chain A 11 122 IPR011333 -
Trre15g02979 366 CDD BACK 123 170 - -
Trre15g02979 366 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 19 335 IPR044513 -
Trre15g02979 366 FunFam BTB/POZ and TAZ domain-containing protein 2 194 321 - -
Trre15g02979 366 Gene3D TAZ domain 194 321 IPR035898 -
Trre15g02979 366 Pfam BTB/POZ domain 22 120 IPR000210 GO:0005515
Trre15g02979 366 SMART BTB_4 21 122 IPR000210 GO:0005515
Trre15g02979 366 SMART TAZ_2 198 293 IPR000197 -
Trre15g02979 366 FunFam BTB/POZ and TAZ domain-containing protein 2 123 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02979 Trre-Chr15 26675139 26678806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Trre15g02979 BTB 5.6e-16 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02979 - - cam:101496955 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02979 15 26675139 26678806 Trre15g02979 15 26675139 26678806 ECH