Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02961 ATGCTACTCATAATCTCTTCAATCTTTCTCATCCTATTTTTGCTAATAAAATGGTATTCCAATTCTACAAAAACCACAAACTCACCTCCTTCTCCTCCAAAATTCCCTATAATAGGAAACCTTCATCAACTTGGCCTATTCCCTCACCGCACATTTCAATCTCTAGCTAAAGAATATGGCCCTTTGATGCAAATCCATCTTGGTAGTGTACCAGTTCTTTTGATCTCATCACCTGAAGCAGCAAGTGAAATAATGAAAACTCATGATCGTGTCTTTGCAAATAGACCTCAAACTAAACTTTATGACATACTTTTATATGATTGCAAAGATGTTTCAACAGCTGAATATGGAGAATATTGGAGACAGATAAGAAGCATATCTGTTTTACATCTTCTTAGTGCTAAAAGAGTTCAATCTCTTCGCGCCGTGAGAGAGGAAGAAATTGCTTTAATGATGGAGAAAATAAAATATTGTTCTTCTATTTCATTACCGGTGGATGTAAGTGAGTTACTCTCCACAACTATCAATGATATAGTTTGTAGAGTTGCTTTAGGAAGAAAATATGATGGTGAAAGTAGGAAGGGATTTAAGAAGTTGTTGATGGATTTTACTGAGTTACTTGGTACTTTTGTTGTTGGAGATTCTGTTCCTTGGCTTGATTGGTTGACACATGTTTCTGGATTTTATTCAAGAGCAGAAAAAGTTGCTAAAAAACTTGATGATCTTTTGGAGGATGTAGTTGAAGATCATATCCGTAGTCAGAAAGGAGGTAATTATGATGGTTCAGATAGTGAAGAAAATGGTGATTTTGTTGATGTTTTGCTTTGGATTCAAAGGACAGAATCACTTGGTTTTCCTATTGACAGAACAGTCATAAAGGCTCTGTTACTGGACATGTTTTCTGCTGGTACAGACACTATATCCACCTTGCTAGAGTGGGCAATGACAGAACTCTTAAGACATCCAAATATCATGAAGAAATTGCAAGAAGAAGTAAAAAGTGTAGTTGGTGATAGAACAAACATAACCGAAGATGATTTGAGTAATATGAAATACTTACAAGCAGTGATTAAAGAAACACTACGATTACATCCACCAATTCCATTATTAGTCCCCCGAGAAAATAGACAAGATATTAAACTAAAAGGTTACCATATCAAAGCTGGAACACGAGTAATTATAAATGCTTGGGCCATTGCAAGAGATCCAACATATTGGAATCAACCTGAAGAATTTAAGCCTGAGAGATTCTTGAATAATTCAATAGATATTAAAGGAAATGATTTTGAATTGATTCCATTTGGAGCAGGGAGAAGGGGTTGCCCTGGGATAGTTTATGCTATGGTTGCCAATGAAATTGTGTTAGCAAACCTTGTACATCAATTTAAATGGGAATTACCTGGTGGTGTTGCAGGATTGGAAACTTTGGACATGTCTGAAACATTTGGTTTAACCATGCATAGAAAGACTCCTCTTGTAGCCGTTGCAACTTGCAACACTTAA 1503 0.3593 MLLIISSIFLILFLLIKWYSNSTKTTNSPPSPPKFPIIGNLHQLGLFPHRTFQSLAKEYGPLMQIHLGSVPVLLISSPEAASEIMKTHDRVFANRPQTKLYDILLYDCKDVSTAEYGEYWRQIRSISVLHLLSAKRVQSLRAVREEEIALMMEKIKYCSSISLPVDVSELLSTTINDIVCRVALGRKYDGESRKGFKKLLMDFTELLGTFVVGDSVPWLDWLTHVSGFYSRAEKVAKKLDDLLEDVVEDHIRSQKGGNYDGSDSEENGDFVDVLLWIQRTESLGFPIDRTVIKALLLDMFSAGTDTISTLLEWAMTELLRHPNIMKKLQEEVKSVVGDRTNITEDDLSNMKYLQAVIKETLRLHPPIPLLVPRENRQDIKLKGYHIKAGTRVIINAWAIARDPTYWNQPEEFKPERFLNNSIDIKGNDFELIPFGAGRRGCPGIVYAMVANEIVLANLVHQFKWELPGGVAGLETLDMSETFGLTMHRKTPLVAVATCNT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02961 500 PANTHER CYTOCHROME P450 71B11-RELATED 13 498 - -
Trre15g02961 500 Gene3D Cytochrome P450 19 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 FunFam Cytochrome P450 83B1 15 495 - -
Trre15g02961 500 Pfam Cytochrome P450 29 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 SUPERFAMILY Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02961 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre15g02961 500 CDD CYP71-like 58 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02961 Trre-Chr15 26424541 26427519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02961 24 500 Cytochrome P450 AT3G48270 53.975 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02961 - - gmx:100819183 624.394