Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02953 ATGACTAACATAACAAAGTGGAGAAGCCTTATAAAGCAGTTCTCATTTGAGTTAACCGATGCTGCTCGTGCTATTGATCCTATGTATTTGAAGGAAGGGGAACAAATTCTTGTGGGATTTGAAGGTCCTTTTGTTTCTCGCAGGGTTACGCCTAGGGATCTTCTTTCTGAATTTATAGGTTCTATGGTCTGTGTTGAGGGCATTATCACCAAATGTGTTATATTATTCTATAAGGATTTTGTGGAATTTCTATATGAGCTTCTTGGAGTAACTGCGTCTATCATAGCTATTGGCCAAGTATCTCATTCAAGAAAGGATTTGGAGCACGGAAAGTTGTTCTCTTTACAAGAACAAATCGATCATAAGTAG 369 0.3794 MTNITKWRSLIKQFSFELTDAARAIDPMYLKEGEQILVGFEGPFVSRRVTPRDLLSEFIGSMVCVEGIITKCVILFYKDFVEFLYELLGVTASIIAIGQVSHSRKDLEHGKLFSLQEQIDHK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02953 122 PANTHER LIPASE 72 122 IPR019363 GO:0005811|GO:0016298|GO:0019915
Trre15g02953 122 Pfam Lipid-droplet associated hydrolase 72 122 IPR019363 GO:0005811|GO:0016298|GO:0019915
Trre15g02953 122 SUPERFAMILY Nucleic acid-binding proteins 12 72 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02953 Trre-Chr15 26250145 26251925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02953 11 78 Core DNA Replication Machinery Family AT5G46280 67.647 3.30e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02953 K02541 - cave:132172742 105.531