Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02952 ATGCTACTCATAATCTCTTCCATCTTTCTCACTCTTTTTATGCTATTAATCAAATGGTATTCCAATTCTACAAAAACCAAAAACTCACCTCCTTCTCCTCCAAAATTACCTATAATAGGAAATCTCCATCAACTTGGCCTATTCCCTCACCGCACACTTCATTCTTTAGCTAAAAAATATGGCCCTTTCATGCAACTTCATCTTGGCAGTGTACCATTTCTTGTGATCTCATCAGCTGATGCAGCACGTGAGATATTGAAAACACATGATCATGTTTTTGCAAACAGACCACAAAAGAAAAATTACAAGATACTTATATATGATTGCAAAGATGTTTCAACAGCTCCATATGGAGAATATTGGAGACAAATAAGAAGTATATCTGTTTTACATCTTCTTAGTGCTAAAAGTGTTCAATCTCTTCGCGCCGTGCGAGAGGAAGAAGTGAGTTTAATGATGGAGAAAATAAAGCAATATTCTTCCAAATCATTACCTTTGAATATAAGTGAATTAATCTCTACAACTACTAATGATATAGTTTGTAGGGTTGCTTTGGGAAGAAAGTATAGTGGTGAAAGTGGTAAGGGATTTAAAAAGTTGTTGATGGATTTTACAGAGTTACTTAGTGTTTTTATTGTTGGAGATTTTGTACCTTGGCTTGATTGGTTGACTCATGTTTCTGGAGTTTATGGAAGAGCTAAAAAAGTGGCTAAACAATTTGATGATCTTTTGGAAGATGTTGTTGAAGATCATATCAAACGTCAGAGAGGAACTAGTGAAGATTTTGGTGACTTTGTTGATGTTTTGCTTTGGATTCAAAAGACAGAATCAACTGGTTTTCCTGTTGACAGAACAATCATAAAAGCTCTGTTATTGGACATGTTTATTGGAGGTACAGACACTGTATCAAGTTTGTTAGAGTGGGAATTGACAGAACTCATAAGACATCCAAATATCATGAAGAAATTGGAAGAAGAAGGAAGGAGGGTGGCTAAAGGTAGATCACACATAAATGAAGATGATTTGATTAACATGAAATACCTAAAGGCAGTGATTAAAGAAACACTACGATTGCATCCTCCATTTTCGCTACTAGTCCCTCGACAAAGTAGACAAGATATAACACTAAACGGTTACGACATTAAAGCTGGCACACATGTTATTATAAATGCATGGGGAATTGCAAGAGATCCTACAAATTGGAATCAACCTGAAGAATTTAAGCCTGAGAGATTCTTGAATAATTCAATAGATATTAAAGGAAATGATTTTCAATTGATTCCATTTGGAGGTGGGAGAAGAGGTTGTCCTGGGATAGCATATGCTACGGCTGTCAATGAAATTGTGTTAGCCAACCTTGTGCATCAATTTAATTGGGAATTACCTGGTGGTGCTGCAGGATTGGAGAAATACTCCTCTAGTGGCACTTGCGGTTCCTAA 1440 0.3611 MLLIISSIFLTLFMLLIKWYSNSTKTKNSPPSPPKLPIIGNLHQLGLFPHRTLHSLAKKYGPFMQLHLGSVPFLVISSADAAREILKTHDHVFANRPQKKNYKILIYDCKDVSTAPYGEYWRQIRSISVLHLLSAKSVQSLRAVREEEVSLMMEKIKQYSSKSLPLNISELISTTTNDIVCRVALGRKYSGESGKGFKKLLMDFTELLSVFIVGDFVPWLDWLTHVSGVYGRAKKVAKQFDDLLEDVVEDHIKRQRGTSEDFGDFVDVLLWIQKTESTGFPVDRTIIKALLLDMFIGGTDTVSSLLEWELTELIRHPNIMKKLEEEGRRVAKGRSHINEDDLINMKYLKAVIKETLRLHPPFSLLVPRQSRQDITLNGYDIKAGTHVIINAWGIARDPTNWNQPEEFKPERFLNNSIDIKGNDFQLIPFGGGRRGCPGIAYATAVNEIVLANLVHQFNWELPGGAAGLEKYSSSGTCGS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02952 479 FunFam Cytochrome P450 83B1 16 474 - -
Trre15g02952 479 PANTHER CYTOCHROME P450 71B11-RELATED 14 465 - -
Trre15g02952 479 SUPERFAMILY Cytochrome P450 30 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Trre15g02952 479 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 Gene3D Cytochrome P450 20 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 Pfam Cytochrome P450 30 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02952 479 CDD CYP71-like 59 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02952 Trre-Chr15 26146605 26148819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02952 1 462 Cytochrome P450 AT3G48280 52.268 6.30e-180 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02952 - - gmx:100819183 585.104