Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02919 ATGGATACACCGCTCTTCCATTTCCTCCACCTTCTCCTCCTCATCCCCACCATTAATTCCCTCGACTTCATCTTCAACTCCTTCAACACCACCACAAACCTCACTCTCACCAACGACACCCGCATAGAATCCCCCGTAATCCGTTTAACCAACGACTCCAACCAATTCTCTCTCGGTAGATTCTTCTTCCATACTAAAATTCCCATGATCACTTCCTTCTCCACTTCCTTCATCTTCTCTATCTTACCTCAAAACCCTAACAGCCCCGGTTTCGGTCTCGCTTTCGTTCTCTGCAACACAACTTCCCCTCCCGGCGCAATAGCAAGTCAATACTTCGGTTTATTCACTAACGCCGTTACTCCAACCGTTTTCCCTCTCTTCGCCGTCGAATTCGATACCGGAAGAAACCCTGAGTTCAACGATCACGATAACAATCACATCGGAATCGATCTCAATAACATCGAATCAAAAACACAAACACCTGCTGGATATTACAACTCCACCGGGAAATTTGTATCGGTGCAAATGAACAGCGGAGAAAATGTTCGAGCGTGGATTGAATTTAACGGTGAGAATTTCGAGATAAATGTTACAGTTGCTCCGATCGGTGTTTCACGACCTTTGAAACCGACGCTTTCGTATAGAGATCCGAATATAAGTAATTATCTTTCTCCTGAAATGTTCGTTGGTTTTTCGGCTTCTAAAACGAATTGGATTGAAGCTCAAAGAGTTCTAGCATGGAGTTTCAGTGATTCAGGAACTGCAAAGGAGTTAAACACAACGAATTTACCGGTTTTCAAGCGAGAATCGTCGAATTCGCTTTCGGGTAAAGCAATTGCAGGGATTGTAGTTGGTTGTTTTGCTTTAGTGTGTTTTAGTTTGTTTATATTATATTTTCTATGGTGGAAAAGAAGAAGAAATGAAGAAGATGATGATGATGTGGAAGAATGGGAAATGGAGTATTGGCCTCATAGATTTTCTTATGAGGAACTATGCATAGCTACAAAGGATTTTCATAATGAGAAGCTTATAGGTTCTGGAGGATTTGGAAGAGTTTACAAAGGAACATTGATGAATAAAACATTGATTGCGGTTAAGTGTGTTAATCATGATTCTAAACAAGGGTTAAGAGAGTTTATGGCAGAGATTTCAAGTATGGGAAGGCTTCAGCATAAGAATTTAGTGCAAATGAGGGGGTGGTGTAGAAAGGGTAATGAACTTATGCTGGTTTATGATTACATGCCTAATGGAAGTTTAAACAAATGGGTTTTTGATAAACCTGAGAAAGTTTTGGGATGGAATCAGCGACGTAGGATTCTTGTTGATGTAGCAGAAGGGCTTAATTATCTTCATCATGGTTGGGATCAGGTTGTTATTCATAGGGATATTAAATCTAGTAATATTTTGTTAGATGCTGATATGAGAGGAAGATTGGGAGATTTTGGTTTGGCTAAGCTTTACCAACATGGGCAAGTTCCGAATACTACACGTGTAGTGGGGACAATAGGGTATTTGGCGCCGGAAATAGCAAATGTTGCTGCGCCTACTTCGGCTAGTGATGTGTATAGTTTTGGGGTGGTGTTGTTGGAAGTGGCTTGTGGGAGGAGGCCTTTGGAGGCGATGGTGGTGGATGACGAAGTTGTGCTTATTGATTGGGTTAGGGAGTTGTATGCAAGAGGGTGTGTAGTTGAAGCTGCGGATAGTAGGATGAAGGGTGAGTATGATGTGGGTGATATGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGTCATCCTGAGCCCACTAGGAGGCCAACTATGAAGGAAGTTGCCGCGCTTCTTCTTGGCGAGGATGTTGCAGATGCGCCGGGGAAAGTTTTGTCCGATTTGGCTTGCGGTGATGATAATGGTGGTGGTGCCAGGGAATCGGATGAGGAGGCGCCTTTGCAATCCTCCTCTCCCATTTGA 1947 0.4309 MDTPLFHFLHLLLLIPTINSLDFIFNSFNTTTNLTLTNDTRIESPVIRLTNDSNQFSLGRFFFHTKIPMITSFSTSFIFSILPQNPNSPGFGLAFVLCNTTSPPGAIASQYFGLFTNAVTPTVFPLFAVEFDTGRNPEFNDHDNNHIGIDLNNIESKTQTPAGYYNSTGKFVSVQMNSGENVRAWIEFNGENFEINVTVAPIGVSRPLKPTLSYRDPNISNYLSPEMFVGFSASKTNWIEAQRVLAWSFSDSGTAKELNTTNLPVFKRESSNSLSGKAIAGIVVGCFALVCFSLFILYFLWWKRRRNEEDDDDVEEWEMEYWPHRFSYEELCIATKDFHNEKLIGSGGFGRVYKGTLMNKTLIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWVFDKPEKVLGWNQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYQHGQVPNTTRVVGTIGYLAPEIANVAAPTSASDVYSFGVVLLEVACGRRPLEAMVVDDEVVLIDWVRELYARGCVVEAADSRMKGEYDVGDMEMVLKLGLACCHPEPTRRPTMKEVAALLLGEDVADAPGKVLSDLACGDDNGGGARESDEEAPLQSSSPI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02919 648 CDD lectin_legume_LecRK_Arcelin_ConA 46 253 IPR001220 GO:0030246
Trre15g02919 648 SMART serkin_6 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02919 648 CDD STKc_IRAK 344 607 - -
Trre15g02919 648 Gene3D - 18 267 - -
Trre15g02919 648 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Trre15g02919 648 ProSiteProfiles Protein kinase domain profile. 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02919 648 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 267 IPR013320 -
Trre15g02919 648 FunFam L-type lectin-domain containing receptor kinase S.1 323 413 - -
Trre15g02919 648 PANTHER - 35 609 - -
Trre15g02919 648 FunFam L-type lectin-domain containing receptor kinase S.4 414 618 - -
Trre15g02919 648 MobiDBLite consensus disorder prediction 625 648 - -
Trre15g02919 648 Pfam Legume lectin domain 20 263 IPR001220 GO:0030246
Trre15g02919 648 SUPERFAMILY Protein kinase-like (PK-like) 315 607 IPR011009 -
Trre15g02919 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Trre15g02919 648 Gene3D Transferase(Phosphotransferase) domain 1 414 614 - -
Trre15g02919 648 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Trre15g02919 648 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02919 Trre-Chr15 25529855 25531801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02919 19 614 Receptor kinase-like Gene Family AT1G15530 64.052 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre15g02919 Pkinase 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02919 - - gmx:100780660 964.911