Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02884 ATGCAAAATTTGAACATCTTATGGGGAATGATCATATTCATAATACCGTGGTTTTTGTCACGTGTGGCGTGCTTCAATGGTGGGATACATGAAGCCGGTCTGACTTGTGATTCTTATCAGTACCCTGCAGATGATGATGATAGCGACAACAAGTTAATGCAAAATTTGATGGTTGTAATGGATGCCGTTTCATTTCAGGTGAAAGAACACGGTTGGGGAGCACAAACATTAGTTGGTAATTGGCATCCAATGTACGCATTAGGCCAATGTCGTCGCGATCTCAATCCCACGGAATGTTATACATGTTTTACCCAAGCCAGACAATTGTTATCGAGGTGTGTGCCAAATGTTTCAGGTAGAATTTACCTTAATGGTTGCTTCCTTCGTTATGACAACTACACTTTCTTTGAAGAGAGCGTGGACGTCACACATGACACAAACATGTGTGGGTCTACGCAAAGGGGAGAGCCGACAGTAGATTCCTCACATGTCACGTCAGTGATTTTGAATGTCAGTAAAGGTGAACATAGGTTTGCAGTGGACGAGGAAGGTGGTGTGTTTGCGTTTGCGCAATGTTGGGAGACAGTCGATAAATGGAGTTGTCAAAGATGTTTGAGAGAAGCGGGGAAAAGAGTGCAGGAATGTGTTCCTAGTGCTGAGGGTAAAAGCTTGTTTACTGGTTGTTTTATGAGGTATTCAACGCGTAAATTCTACAACGACGTTGTTGTGCTAAACGATACATGGATTACTCCTCCCACTCAACAAGAAAAGCATGAGTGGATAATCCTTGCATGTGTAATATCAGCAATTGTAGTCATCTTCTTAATTATCACCCCTAGTGTATTTCTGAGCAAGAACAGAAAAATACCACATGAAAAAAAGAACAAGTTTGGCGCATCACCTAGTTTTGCCAACGTAGCTGGTTTTAGTTTTAGGTACGATGTGCTTGAGAAGGCAACGGGTAATTTCGATCCTACAAACAGATTAGGCATGCAAGGAGAAGAAAATCATGGTTCTGTGTACAAAGCAATACTCCCATCGGGAAGAAACGTTGCTGTTAAACGTTTGTATTTCGATACACGACAATGGACAAACATGTTATTCAATGAGATCAATTTGATTAATGGAATTCAACATAAGAATGTGGTGAAACTTTTGGGATGTAGCGTTGATGGCCCTGAAAGCCTTTTGGTTTATGAATTTCTTCCCAATAAAAGTCTTGATCAAATCCTTTTCGATAAGGATTCAGAAAATGTTCTAGCTTGGGAGAAACGGTTTCAAATCATATGTGGGATAGCTGAGGGTTTAGCATATCTTCATGAAGGGTCTGGAACAAAGATTATTCACAGAGACATAAAGTCCAGCAACATTTTACTTGATGAGGCTCTAAATCCAAAAATTGTTGATTTTGGTCTTGCTCTTTGTGTTGCTGAAAACAAATCTCATATTAACACCACTAAAATTGCAAAGACATTGGGACATATGGCTCCTGAGAGTATCGACCGAGGACAACTGACAGAGAAGGCAGATATATATGCTTTTGGTACGATGGTTATCGAAATTATCTGTGGTAAAAAGAATGATGTTTTCACACAAGGGTCAGATTCATTACTCCACTATGTATGGAAGAATTACATTGCAAACAATATTACAATATCAGTTGATCATGATCTGCATGGAAATTTTGAGGAAGAAGAGGCATCAAATGCTCTTCAAGCTTCTCTTCTTTGTACACAATCTTCTCCAAATCTTAGACCATCCATGTCAGAAGTAGTTCAAATGCTAACAAAAAAAGACTACATTATTCCCATCCCAAAGGAACAACCATTCCTTAATTATACTAAGCACAGAACCTTAGCTTCCACCATGAGCCTTATGTCAAATGGACTTACAAGTACAAGATCATCTTTTCATAGCACCACTAGTTCCTTACATCCAGGTGAAGATGCAACATTGTTAGAGAATCCTTTTTCTTCTTCTGCTAGGTTCAACACTTCAGAGAGCCCTGATTCAAATATCCAAACAAACATTGTGGTACCTCAGCCAAGGTAG 2052 0.3952 MQNLNILWGMIIFIIPWFLSRVACFNGGIHEAGLTCDSYQYPADDDDSDNKLMQNLMVVMDAVSFQVKEHGWGAQTLVGNWHPMYALGQCRRDLNPTECYTCFTQARQLLSRCVPNVSGRIYLNGCFLRYDNYTFFEESVDVTHDTNMCGSTQRGEPTVDSSHVTSVILNVSKGEHRFAVDEEGGVFAFAQCWETVDKWSCQRCLREAGKRVQECVPSAEGKSLFTGCFMRYSTRKFYNDVVVLNDTWITPPTQQEKHEWIILACVISAIVVIFLIITPSVFLSKNRKIPHEKKNKFGASPSFANVAGFSFRYDVLEKATGNFDPTNRLGMQGEENHGSVYKAILPSGRNVAVKRLYFDTRQWTNMLFNEINLINGIQHKNVVKLLGCSVDGPESLLVYEFLPNKSLDQILFDKDSENVLAWEKRFQIICGIAEGLAYLHEGSGTKIIHRDIKSSNILLDEALNPKIVDFGLALCVAENKSHINTTKIAKTLGHMAPESIDRGQLTEKADIYAFGTMVIEIICGKKNDVFTQGSDSLLHYVWKNYIANNITISVDHDLHGNFEEEEASNALQASLLCTQSSPNLRPSMSEVVQMLTKKDYIIPIPKEQPFLNYTKHRTLASTMSLMSNGLTSTRSSFHSTTSSLHPGEDATLLENPFSSSARFNTSESPDSNIQTNIVVPQPR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02884 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Trre15g02884 683 ProSiteProfiles Gnk2-homologous domain profile. 137 237 IPR002902 -
Trre15g02884 683 Pfam Salt stress response/antifungal 178 234 IPR002902 -
Trre15g02884 683 Pfam Salt stress response/antifungal 53 133 IPR002902 -
Trre15g02884 683 Gene3D - 156 237 IPR038408 -
Trre15g02884 683 Gene3D - 35 135 IPR038408 -
Trre15g02884 683 MobiDBLite consensus disorder prediction 661 683 - -
Trre15g02884 683 ProSiteProfiles Gnk2-homologous domain profile. 34 135 IPR002902 -
Trre15g02884 683 ProSiteProfiles Protein kinase domain profile. 326 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02884 683 FunFam Cysteine-rich receptor-like protein kinase 2 402 602 - -
Trre15g02884 683 SUPERFAMILY Protein kinase-like (PK-like) 310 628 IPR011009 -
Trre15g02884 683 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02884 683 Pfam Protein kinase domain 333 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02884 683 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 629 - -
Trre15g02884 683 Gene3D Transferase(Phosphotransferase) domain 1 402 602 - -
Trre15g02884 683 Gene3D Phosphorylase Kinase; domain 1 302 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02884 Trre-Chr15 25048182 25050882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02884 55 612 Receptor kinase-like Gene Family AT1G70520 38.995 3.47e-137 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02884 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02884 - - mtr:25493752 904.049