Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02841 ATGGCAGCTCGCACACTTTCTCGTCTGCTCTCTCGCTCTCTATCTTCTTCTTCTTCTTCTTCTTCTTATGGAGGTTCTGCTTCTCTGCTTCGTTCATCACTAGGAAGAAAATCTGAAGGATGGATAAACAGAAACAGATTTAGCACTGCTGCAGCTGTTGAGGAATTGATCACTCCACAAGTTTCAATAAATTATACACAGCATCTCATAAATGGTCAATTTGTCGATGCTGCATCAGGGAAAACATTTCCAACTTATGATCCACGCACAGGGGAAGCGATTGCTCATGTTGCTGAAGGCGATGCTGAAGATATTAACCGCGCAGTATCAGCAGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGTCTGCTTATGAAAGATGTCGTATTTTGCTGCGGTTTGCTGATTTGGTTGAGAAACACAATGATGAGATTGCAGCTCTGGAGGCATGGAACAATGGAAAGCTTTATGAACAGGCTGCCAAGGCTGAAGTACCTATGTTTGTGCGTTTATTTCGCTATTATGCTGGTTGGGCAGATAAAATTCATGGGTTGACAGTTCCAGCTGATGGAGATTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTATCCTCAAGACTGCTGAGCAAACACCGCTAACAGCGCTCCTTGTGGCAAAACTACTTCATGAGGCTGGTCTTCCCCCAGGTGTTCTGAATATAGTTTCTGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTAGACAAGCTAGCGTTCACTGGATCGACAGATACTGGAAAAACTGTACTTGAACTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAACTTGGAGGGAAATCACCTTTCATTGTTTTTGAGGATGCTGATGTTAACAAGGCTGTTGAAATTGCACACTTTGCTTTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGATCCCGTACCTTTGTACATGAGCGTATCTATGACGAGTTCTTGGAGAAATCAAAGGAACGGGCTTTGCGACGCGTTGTTGGTGATCCATTTAAGAAGGGTGTAGAACAAGGCCCTCAGATTGATTCGAAACAATTTGAGAAAGTGCTTAGGTACATAAGGTCTGGAATTGATAGCAATGCTACTCTTGAATGTGGAGGTGGGCGATTGGGTTCAAAAGGCTTCTTTGTCCAGCCAACTGTATTCTCCAATGTTCAGGATGATATGTTGATAGCAAAAGATGAAATCTTTGGCCCAGTTCAGACCATCTTTAAGTTCAAGGACATTGATGAAGTGATACGACGGGCAAATGCGACACGTTATGGTTTAGCAGCAGGTGTTTTTACAAAAAATGTGAGCACAGCCAACACTATGATGAGGGCACTAAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGTTACAAAATGAGTGGGATTGGTAGGGAGAAAGGTATATACAGTCTTCACAACTATCTGCAGGTAAAAGCTGTGGTGACTCCACTGAACAATCCTGCGTGGTTGTGA 1641 0.4339 MAARTLSRLLSRSLSSSSSSSSYGGSASLLRSSLGRKSEGWINRNRFSTAAAVEELITPQVSINYTQHLINGQFVDAASGKTFPTYDPRTGEAIAHVAEGDAEDINRAVSAAREAFDNGPWPKMSAYERCRILLRFADLVEKHNDEIAALEAWNNGKLYEQAAKAEVPMFVRLFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIILKTAEQTPLTALLVAKLLHEAGLPPGVLNIVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKTVLELAARSNLKPVTLELGGKSPFIVFEDADVNKAVEIAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKERALRRVVGDPFKKGVEQGPQIDSKQFEKVLRYIRSGIDSNATLECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQTIFKFKDIDEVIRRANATRYGLAAGVFTKNVSTANTMMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLNNPAWL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02841 546 Pfam Aldehyde dehydrogenase family 74 536 IPR015590 GO:0016491
Trre15g02841 546 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 340 351 IPR016160 GO:0016491
Trre15g02841 546 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 312 319 IPR029510 GO:0016491
Trre15g02841 546 FunFam Aldehyde dehydrogenase, putative 508 534 - -
Trre15g02841 546 CDD ALDH_F2BC 63 538 - -
Trre15g02841 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 316 505 IPR016163 GO:0016620
Trre15g02841 546 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 70 339 - -
Trre15g02841 546 FunFam Mitochondrial aldehyde dehydrogenase 2 318 507 - -
Trre15g02841 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 70 534 IPR016162 GO:0016491
Trre15g02841 546 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 51 536 - -
Trre15g02841 546 SUPERFAMILY ALDH-like 60 541 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02841 Trre-Chr15 24534348 24537722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02841 1 546 Aldehyde Dehydrogenase Gene Family AT3G48000 77.697 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02841 K00128 - gmx:100811501 926.776