Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g02841 | ATGGCAGCTCGCACACTTTCTCGTCTGCTCTCTCGCTCTCTATCTTCTTCTTCTTCTTCTTCTTCTTATGGAGGTTCTGCTTCTCTGCTTCGTTCATCACTAGGAAGAAAATCTGAAGGATGGATAAACAGAAACAGATTTAGCACTGCTGCAGCTGTTGAGGAATTGATCACTCCACAAGTTTCAATAAATTATACACAGCATCTCATAAATGGTCAATTTGTCGATGCTGCATCAGGGAAAACATTTCCAACTTATGATCCACGCACAGGGGAAGCGATTGCTCATGTTGCTGAAGGCGATGCTGAAGATATTAACCGCGCAGTATCAGCAGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGTCTGCTTATGAAAGATGTCGTATTTTGCTGCGGTTTGCTGATTTGGTTGAGAAACACAATGATGAGATTGCAGCTCTGGAGGCATGGAACAATGGAAAGCTTTATGAACAGGCTGCCAAGGCTGAAGTACCTATGTTTGTGCGTTTATTTCGCTATTATGCTGGTTGGGCAGATAAAATTCATGGGTTGACAGTTCCAGCTGATGGAGATTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTATCCTCAAGACTGCTGAGCAAACACCGCTAACAGCGCTCCTTGTGGCAAAACTACTTCATGAGGCTGGTCTTCCCCCAGGTGTTCTGAATATAGTTTCTGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTAGACAAGCTAGCGTTCACTGGATCGACAGATACTGGAAAAACTGTACTTGAACTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAACTTGGAGGGAAATCACCTTTCATTGTTTTTGAGGATGCTGATGTTAACAAGGCTGTTGAAATTGCACACTTTGCTTTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGATCCCGTACCTTTGTACATGAGCGTATCTATGACGAGTTCTTGGAGAAATCAAAGGAACGGGCTTTGCGACGCGTTGTTGGTGATCCATTTAAGAAGGGTGTAGAACAAGGCCCTCAGATTGATTCGAAACAATTTGAGAAAGTGCTTAGGTACATAAGGTCTGGAATTGATAGCAATGCTACTCTTGAATGTGGAGGTGGGCGATTGGGTTCAAAAGGCTTCTTTGTCCAGCCAACTGTATTCTCCAATGTTCAGGATGATATGTTGATAGCAAAAGATGAAATCTTTGGCCCAGTTCAGACCATCTTTAAGTTCAAGGACATTGATGAAGTGATACGACGGGCAAATGCGACACGTTATGGTTTAGCAGCAGGTGTTTTTACAAAAAATGTGAGCACAGCCAACACTATGATGAGGGCACTAAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGTTACAAAATGAGTGGGATTGGTAGGGAGAAAGGTATATACAGTCTTCACAACTATCTGCAGGTAAAAGCTGTGGTGACTCCACTGAACAATCCTGCGTGGTTGTGA | 1641 | 0.4339 | MAARTLSRLLSRSLSSSSSSSSYGGSASLLRSSLGRKSEGWINRNRFSTAAAVEELITPQVSINYTQHLINGQFVDAASGKTFPTYDPRTGEAIAHVAEGDAEDINRAVSAAREAFDNGPWPKMSAYERCRILLRFADLVEKHNDEIAALEAWNNGKLYEQAAKAEVPMFVRLFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIILKTAEQTPLTALLVAKLLHEAGLPPGVLNIVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKTVLELAARSNLKPVTLELGGKSPFIVFEDADVNKAVEIAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKERALRRVVGDPFKKGVEQGPQIDSKQFEKVLRYIRSGIDSNATLECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQTIFKFKDIDEVIRRANATRYGLAAGVFTKNVSTANTMMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLNNPAWL | 546 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g02841 | 546 | Pfam | Aldehyde dehydrogenase family | 74 | 536 | IPR015590 | GO:0016491 | |
Trre15g02841 | 546 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 340 | 351 | IPR016160 | GO:0016491 | |
Trre15g02841 | 546 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 312 | 319 | IPR029510 | GO:0016491 | |
Trre15g02841 | 546 | FunFam | Aldehyde dehydrogenase, putative | 508 | 534 | - | - | |
Trre15g02841 | 546 | CDD | ALDH_F2BC | 63 | 538 | - | - | |
Trre15g02841 | 546 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 316 | 505 | IPR016163 | GO:0016620 | |
Trre15g02841 | 546 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 70 | 339 | - | - | |
Trre15g02841 | 546 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 318 | 507 | - | - | |
Trre15g02841 | 546 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 70 | 534 | IPR016162 | GO:0016491 | |
Trre15g02841 | 546 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 51 | 536 | - | - | |
Trre15g02841 | 546 | SUPERFAMILY | ALDH-like | 60 | 541 | IPR016161 | GO:0016491 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g02841 | Trre-Chr15 | 24534348 | 24537722 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g02841 | 1 | 546 | Aldehyde Dehydrogenase Gene Family | AT3G48000 | 77.697 | 0.0 | 898 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g02841 | K00128 | - | gmx:100811501 | 926.776 |