Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02812 ATGAAAATGAAACAATATTTGTTGGAATGTACTCCATTTGCAGCAATGGTGATTGTAGAGTGCCTTGACGTAGGGTTGACCACATTGACTAAAGCAGCCATGTCCACAAAAGGAATGAACCATTTCATCTTTGTTCTCTACTCCAATGCTCTTGCCACTCTCATTCTCCTCCCTTCCTCTTTCCTCATCAACAGGTCAACAAGACAACCCCTTTCTTTCTCCCTTCTTGGAAAATTCTTCTTCCTCGGTCTTGTCGGCATAACTATCATGCAGAATTGTGTATTCACTGGCATAAGCTACAGCTCTCCCACCCTTGGATCAGCTATGAGCAACTTGACTCCAGCAATCACTTTTGTTCTAGCAGTCATCTTCAGGATGGAGAAGTTGGATGTTGGAAGCTCAATAAGCCAGATCAAAATTGTGGGGACTGTGGTGTCTATCTCAGGAGCATTTCTAGTGACCTTTTACAAGGGCGCTCCCATTGGCAGCTTTCAAACTCGGCACTCATCGCAACCATTGGTGTCTCTGTTGGCAGAAACCAGTAACTGGGTCACTGGAGGTCTCTTCCTAGCCATTGCCTCTATATCTCTTGCAGTATGGAATATTGCTCAGGCAGCAATTCTTAAGGGATATCCATCTCAGTTGACCATAGTTGCATTCTATTGCCTGTTTGGAACCTTTCAATGTGCAATACTTTCTCTGATTGTAGTCAAAGATCCAAGTTCCTGGAAACTAAGTCTTGACATTGAGCTAATCTCTATAATCTATTCAGCTATTTTCGGAAGTGTGGTGACATTTTCTGTGCTTACTTGGTGCATAGATAGGAAAGGACCTTTATTTGTTACCATGTTCAAGCCTGTTGGGATTGCCATTGCTGCATTTATGAGTGTTGCCTTCCTTGGTGAAACACTCCATATTGGCAGTGTCATCGGCGCACTAGTAATCGCCATTGGATTTTACGCAGTAATGTGGGCACAATCTAGAGAGAAAAATATGAAAGGCCTTGAAGTTAATGGATTACCATCATCCTCATCTGCCCAAGAAAGTCCTCTACTAGAGTCTCCATGA 1068 0.4307 MKMKQYLLECTPFAAMVIVECLDVGLTTLTKAAMSTKGMNHFIFVLYSNALATLILLPSSFLINRSTRQPLSFSLLGKFFFLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMEKLDVGSSISQIKIVGTVVSISGAFLVTFYKGAPIGSFQTRHSSQPLVSLLAETSNWVTGGLFLAIASISLAVWNIAQAAILKGYPSQLTIVAFYCLFGTFQCAILSLIVVKDPSSWKLSLDIELISIIYSAIFGSVVTFSVLTWCIDRKGPLFVTMFKPVGIAIAAFMSVAFLGETLHIGSVIGALVIAIGFYAVMWAQSREKNMKGLEVNGLPSSSSAQESPLLESP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02812 355 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020
Trre15g02812 355 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Trre15g02812 355 MobiDBLite consensus disorder prediction 336 355 - -
Trre15g02812 355 PANTHER WAT1-RELATED PROTEIN 12 336 IPR030184 GO:0016020|GO:0022857
Trre15g02812 355 MobiDBLite consensus disorder prediction 337 355 - -
Trre15g02812 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Trre15g02812 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02812 Trre-Chr15 24138288 24140254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02812 1 354 Nodulin-like Gene Family AT3G28050 45.257 1.87e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02812 - - psat:127073896 556.214