Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02807 ATGTCGCTCAAAAGGGGTCCCGATGATAACAAGACTCCTGATGACAAGCGTAGAAAGCCACCTCCTTTTTGCAGTGTGGTGCGTGAGGTGATGAAGTTGCAATCAGTCAGGAATTTGATGGAACCGATTCTAGAACCCTTGGTTCGTCGAGTGGTTAAGGAGGAAGTTGAGTTGGCCCTAAAGAAGCATTTGAGCAGCATGAAACAGACTTGTGGAAAGGAGTTGAATACTAAAGAATTAAGAACTTTGCAGCTTCAGTTTGAAAACAGCATTTCTCTCCCTGTCTTCACAGGAGCTCGAATTGAAGGAGAAGATGGTTCAAACTTAAGGATAAGATTAGTTGATGCTTTAACAGGGAAGGTTGTTTGTACAGGAGCTGAATCTTCAGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGCGATGTTTGGATGCCTGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGATGGAAAAAAGCCCCTCCTTACGGGAGATGTGATTTTATATCTGAAAGATGGGTTTTGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCCGGCTTGGAGCAAGAGTATTGGACAGCTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGATTCATTCATCGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCAAGTCTGTCGGATGAAGTTTGGAGACTGGAAAAGATCGGCAAAGATGGAGCTTTTCACCGGCGTTTGAGTCGTGAAAAGATCCGCACTGTTAAAGATTTTCTCACACTACTCAATCTTGATCCAGCAAAGCTGCGAACTATATTAGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTAGAGCATGCTCGGACTTGTGTTCTTGATACAACAAGGCATGTGTCCTTCGCCGCTCATTCTCAACAACCTCATGTGGTCTTCAATGCCGTGGGACAAGTGACAGGACTGCTCTCTGAATGCGAGTATGTCGCTGTGGATAAGCTGTCTGAAACCGAAAAGGCTGATGCACAAATCTCGGTTATTTCTGCACTTACCCAAGGCGATTTTGCCTCTTTAGAAGACGAGGCTTCCCTAATGGATGGTTATTCACACTTAACTAGTGTCCATTACTCCCCGAGCTCTCCAAGAACTGAGGGATCAAGTGCCAACAAGCTTTTGGCTCCGCAAAAGACTGGAGGATTCAATTACACACAAGAAAGTGCCTCTTCTACAGATATCATGCCATCTATTTATTCGGTCGGGGGAAGTAGTGGCTTGGATGAATATGGCTTGCCGAATTTTGACAGCATCGGACTTAGATATGATCAGAATCTTGGCTTTCCAATGCAAGTATCCAACTCTTTGATCTGCGACACGGATTCAATAGTCCATGCTTTCGGTGATGATGATCATCTGCAATTTTTCGATGCTGATCTTCAATCTCAGTGCCACATTGAAGCAGATTTACAGCGTGCTGTTGATAGCTTCATGCTGGCACCTTCTCCATCTATGGCTAATGGAAAAGCTCAGAGACGATGGAGAAAAGTAGTCAATGTTCTAAAATGGTTCTTGGTTAGGAAACGACGAAACCAATTATATAGGTAA 1644 0.4361 MSLKRGPDDNKTPDDKRRKPPPFCSVVREVMKLQSVRNLMEPILEPLVRRVVKEEVELALKKHLSSMKQTCGKELNTKELRTLQLQFENSISLPVFTGARIEGEDGSNLRIRLVDALTGKVVCTGAESSAKVEIVVLEGDFEEESDVWMPEDFKNNIVRERDGKKPLLTGDVILYLKDGFCMVGEISYTDNSSWTRSRRFRLGARVLDSFDGIRIREAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHRRLSREKIRTVKDFLTLLNLDPAKLRTILGTGMSAKMWEVTVEHARTCVLDTTRHVSFAAHSQQPHVVFNAVGQVTGLLSECEYVAVDKLSETEKADAQISVISALTQGDFASLEDEASLMDGYSHLTSVHYSPSSPRTEGSSANKLLAPQKTGGFNYTQESASSTDIMPSIYSVGGSSGLDEYGLPNFDSIGLRYDQNLGFPMQVSNSLICDTDSIVHAFGDDDHLQFFDADLQSQCHIEADLQRAVDSFMLAPSPSMANGKAQRRWRKVVNVLKWFLVRKRRNQLYR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02807 547 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Trre15g02807 547 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Trre15g02807 547 MobiDBLite consensus disorder prediction 1 22 - -
Trre15g02807 547 Pfam Calmodulin binding protein C-terminal domain 319 368 IPR046829 -
Trre15g02807 547 PANTHER OS02G0177800 PROTEIN 4 416 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02807 Trre-Chr15 24059843 24063738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02807 5 354 Calmodulin-binding Proteins AT5G62570 60.399 5.27e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02807 - - gmx:100793156 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02807 15 24059843 24063738 Trre15g02807 15 24059843 24063738 ECH