Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02806 ATGTCGCTCAAAAGGGGTCCCGATGATAACAAGACTCCTGATGACAAGCGTAGAAAGCCACCTCCTTTTTGCAGTGTGGTGCGTGAGGTGATGAAGTTGCAATCAGTCAGGAATTTGATGGAACCGATTCTAGAACCCTTGGTTCGTCGAGTGGTTAAGGAGGAAGTTGAGTTGGCCCTAAAGAAGCATTTGAGCAGCATGAAACAGACTTGTGGAAAGGAGTTGAATACTAAAGAATTAAGAACTTTGCAGCTTCAGTTTGAAAACAGCATTTCTCTCCCTGTCTTCACAGGAGCTCGAATTGAAGGAGAAGATGGTTCAAACTTAAGGATAAGATTAGTTGATGCTTTAACAGGGAAGGTTGTTTGTACAGGAGCTGAATCTTCAGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGCGATGTTTGGATGCCTGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGATGGAAAAAAGCCCCTCCTTACGGGAGATGTGATTTTATATCTGAAAGATGGGTTTTGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCCGGCTTGGAGCAAGAGTATTGGACAGCTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGATTCATTCATCGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCAAGTCTGTCGGATGAAGTTTGGAGACTGGAAAAGATCGGCAAAGATGGAGCTTTTCACCGGCGTTTGAGTCGTGAAAAGATCCGCACTGTTAAAGATTTTCTCACACTACTCAATCTTGATCCAGCAAAGCTGCGAACTATATTAGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTAGAGCATGCTCGGACTTGTGTTCTTGATACAACAAGGCATGTGTCCTTCGCCGCTCATTCTCAACAACCTCATGTGGTCTTCAATGCCGTGGGACAAGTGACAGGACTGCTCTCTGAATGCGAGTATGTCGCTGCTGATGCACAAATCTCGGTTATTTCTGCACTTACCCAAGGCGATTTTGCCTCTTTAGAAGACGAGGCTTCCCTAATGGATGGTTATTCACACTTAACTAGTGTCCATTACTCCCCGAGCTCTCCAAGAACTGAGGGATCAAGTGCCAACAAGCTTTTGGCTCCGCAAAAGACTGGAGGATTCAATTACACACAAGAAAGTGCCTCTTCTACAGATATCATGCCATCTATTTATTCGGTCGGGGGAAGTAGTGGCTTGGATGAATATGGCTTGCCGAATTTTGACAGCATCGGACTTAGATATGATCAGAATCTTGGCTTTCCAATGCAAGTATCCAACTCTTTGATCTGCGACACGGATTCAATAGTCCATGCTTTCGGTGATGATGATCATCTGCAATTTTTCGATGCTGATCTTCAATCTCAGTGCCACATTGAAGCAGATTTACAGCGTGCTGTTGATAGCTTCATGCTGGCACCTTCTCCATCTATGGCTAATGGAAAAGCTCAGAGACGATGGAGAAAAGTAGTCAATGTTCTAAAATGGTTCTTGGTTAGGAAACGACGAAACCAATTATATAGCTTGCCAGAGGTTAAAGAGCTGTTTTGCTCTTCTCTTTTATTGTTTAAAATCGAGTTTGTAAATACTTGGATGTTTTGTTTACAGTCAAGAGAGGATTTCTGA 1716 0.4307 MSLKRGPDDNKTPDDKRRKPPPFCSVVREVMKLQSVRNLMEPILEPLVRRVVKEEVELALKKHLSSMKQTCGKELNTKELRTLQLQFENSISLPVFTGARIEGEDGSNLRIRLVDALTGKVVCTGAESSAKVEIVVLEGDFEEESDVWMPEDFKNNIVRERDGKKPLLTGDVILYLKDGFCMVGEISYTDNSSWTRSRRFRLGARVLDSFDGIRIREAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHRRLSREKIRTVKDFLTLLNLDPAKLRTILGTGMSAKMWEVTVEHARTCVLDTTRHVSFAAHSQQPHVVFNAVGQVTGLLSECEYVAADAQISVISALTQGDFASLEDEASLMDGYSHLTSVHYSPSSPRTEGSSANKLLAPQKTGGFNYTQESASSTDIMPSIYSVGGSSGLDEYGLPNFDSIGLRYDQNLGFPMQVSNSLICDTDSIVHAFGDDDHLQFFDADLQSQCHIEADLQRAVDSFMLAPSPSMANGKAQRRWRKVVNVLKWFLVRKRRNQLYSLPEVKELFCSSLLLFKIEFVNTWMFCLQSREDF 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02806 571 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Trre15g02806 571 PANTHER OS02G0177800 PROTEIN 4 350 IPR012416 GO:0005516
Trre15g02806 571 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Trre15g02806 571 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02806 Trre-Chr15 24059843 24063963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02806 5 355 Calmodulin-binding Proteins AT5G62570 59.091 1.30e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02806 - - gmx:100793156 842.802